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See other CDHR5 CNV Assays ›
Gene Symbol
CDHR5
Assay Reference Genome
Location

Chr.11:624230 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01177690_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 53841

Gene Name:

 cadherin related family member 5

Gene Aliases:

 MLPCDH, MU-PCDH, MUCDHL, MUPCDH

Location:

 Chr.11:616565-625067 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDHR5 NM_001171968.1 NP_001165439.1
NM_021924.4 NP_068743.2
NM_031264.3 NP_112554.2
XM_006718253.3 XP_006718316.1
XM_011520188.2 XP_011518490.1
XM_011520189.2 XP_011518491.1
XM_011520190.2 XP_011518492.1
XM_011520191.2 XP_011518493.1
AF258675.1 AAG16732.1
AF258676.1 AAG16733.1
AF258677.1
AF258678.1
AF258679.1
AF276242.1 AAG30821.1
AF301909.1 AAG33495.1
AK000226.1 BAA91021.1
AK000384.1 BAA91130.1
AK300991.1
AK308040.1
AK309157.1
AY358368.1 AAQ88734.1
BC038405.1 AAH38405.1
DA373160.1
DQ491193.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv1523n54 Chr.11:557342 - 656940 on Build GRCh38 Gain LOC143666 DEAF1 CDHR5 MIR210HG LMNTD2 MIR210 DRD4 IRF7 SCT RASSF7 PHRF1
nsv552865 Chr.11:612843 - 626730 on Build GRCh38 Loss CDHR5 IRF7 SCT
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion LRRC56 LOC143666 CDHR5 MIR210HG LMNTD2 MIR210 LOC101059906 IRF7 SCT RASSF7 HRAS PHRF1
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss LOC101927503 CEND1 LRRC56 PKP3 LOC143666 MUC2 CRACR2B DEAF1 SIGIRR LMNTD2 TALDO1 LOC171391 PHRF1 SLC25A22 PTDSS2 CDHR5 EPS8L2 RNH1 MIR210HG MIR6744 LOC101059906 IRF7 POLR2L B4GALNT4 ANO9 MUC5B RASSF7 TOLLIP PANO1 RPLP2 MUC5AC MIR210 PIDD1 PDDC1 TSPAN4 AP2A2 CHID1 SNORA52 MUC6 DRD4 TMEM80 CD151 SCT HRAS PNPLA2
nsv552861 Chr.11:589246 - 662407 on Build GRCh38 Loss DEAF1 CDHR5 DRD4 IRF7 SCT PHRF1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss LOC101927503 CEND1 LRRC56 LOC143666 MUC2 CRACR2B DEAF1 SIGIRR LMNTD2 TALDO1 LOC171391 PHRF1 SLC25A22 PTDSS2 CDHR5 EPS8L2 RNH1 MIR210HG MIR6744 LOC101059906 IRF7 POLR2L ANO9 MUC5B RASSF7 TOLLIP PANO1 RPLP2 MUC5AC TOLLIP-AS1 MIR210 PIDD1 PDDC1 TSPAN4 AP2A2 CHID1 SNORA52 MUC6 DRD4 TMEM80 CD151 SCT HRAS PNPLA2
esv2762889 Chr.11:606294 - 653614 on Build GRCh38 Loss DEAF1 CDHR5 DRD4 IRF7 SCT PHRF1
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain LRRC56 LOC143666 DEAF1 LMNTD2 MIR210 PHRF1 CDHR5 MIR210HG DRD4 IRF7 SCT RASSF7 HRAS
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion CEND1 LRRC56 PKP3 LOC143666 CRACR2B DEAF1 SIGIRR LMNTD2 TALDO1 LOC171391 PHRF1 SLC25A22 PTDSS2 CDHR5 EPS8L2 RNH1 MIR210HG LOC101059906 IRF7 POLR2L B4GALNT4 ANO9 RASSF7 PANO1 RPLP2 MIR210 PIDD1 PDDC1 TSPAN4 AP2A2 CHID1 SNORA52 DRD4 TMEM80 CD151 SCT HRAS PNPLA2
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain LRRC56 LOC143666 DEAF1 LMNTD2 MIR210 PHRF1 PTDSS2 CDHR5 RNH1 MIR210HG LOC101059906 DRD4 IRF7 SCT RASSF7 HRAS
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion CEND1 LRRC56 LOC143666 CRACR2B DEAF1 LMNTD2 TALDO1 LOC171391 PHRF1 SLC25A22 PTDSS2 CDHR5 EPS8L2 RNH1 MIR210HG LOC101059906 IRF7 POLR2L RASSF7 PANO1 RPLP2 MIR210 PIDD1 PDDC1 TSPAN4 CHID1 SNORA52 DRD4 TMEM80 CD151 SCT HRAS PNPLA2

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