Hs01183001_cn

• Gene Symbol: MEGF6
• Assay Reference Genome Location: Chr.1:3497073 on build GRCh38
• Cytoband: 1p36.32

Target Gene Details

• Entrez Gene ID: 1953
• Gene Name: multiple EGF like domains 6
• Gene Aliases: EGFL3
• Location: Chr.1:3487942-3624757 on Build GRCh38
• Assay Gene Location: Within Exon 31

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MEGF6	NM_001409.3	28	3755	NP_001400.3
	XM_006710406.3	25	3390	XP_006710469.1
	XM_011540885.1	29	4060	XP_011539187.1
	XM_011540886.1	29	4060	XP_011539188.1
	XM_011540887.2	24	3268	XP_011539189.1
	XM_011540888.2	29	4060	XP_011539190.1
	XM_017000533.1	28	3928	XP_016856022.1
	AB011539.2			BAA32467.2
	AB231860.1	28	3755
	BU501408.1	3	203

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2758915	Chr.1:3372374 - 3632289 on Build GRCh38	Gain	ARHGEF16 TPRG1L MIR551A MEGF6 WRAP73 PRDM16
nsv470687	Chr.1:3356499 - 3763210 on Build GRCh38	Loss	ARHGEF16 CCDC27 TP73 TP73-AS1 TPRG1L MIR551A MEGF6 WRAP73 PRDM16
nsv1012423	Chr.1:3477686 - 4747449 on Build GRCh38	Gain	CEP104 ARHGEF16 TP73 TP73-AS1 LOC284661 TPRG1L MIR551A DFFB MEGF6 WRAP73 LINC01346 SMIM1 C1orf174 CCDC27 AJAP1 LRRC47 LINC01134
nsv951959	Chr.1:3051037 - 3812036 on Build GRCh38	Deletion	ARHGEF16 TP73 TP73-AS1 LINC00982 TPRG1L MIR551A LOC105378604 MEGF6 WRAP73 PRDM16 SMIM1 CCDC27 MIR4251 LRRC47
esv3893545	Chr.1:3460878 - 3512044 on Build GRCh38	Loss	ARHGEF16 MEGF6
nsv545125	Chr.1:3490443 - 3540731 on Build GRCh38	Loss	MEGF6
nsv830203	Chr.1:3446374 - 3607752 on Build GRCh38	Loss	ARHGEF16 MIR551A MEGF6
nsv299	Chr.1:3476928 - 3512705 on Build GRCh38	Insertion	ARHGEF16 MEGF6

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

extracellular matrix protein

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

calcium ion binding
protein binding