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See other ATG7 CNV Assays ›
Gene Symbol
ATG7
Assay Reference Genome
Location

Chr.3:11557293 on build GRCh38
Cytoband
3p25.3
Assay ID Hs01183840_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 10533

Gene Name:

 autophagy related 7

Gene Aliases:

 APG7-LIKE, APG7L, GSA7

Location:

 Chr.3:11272324-11564704 on Build GRCh38

Assay Gene Location:

 Within Exon 27
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATG7 NM_001136031.2 18 4598 NP_001129503.2
NM_001144912.1 17 4439 NP_001138384.1
NM_006395.2 19 4679 NP_006386.1
XM_017005547.1 XP_016861036.1
XM_017005554.1 XP_016861043.1
AL122075.1 13 4028 CAB59250.1

Target Gene Details

Entrez Gene ID:

 9686

Gene Name:

 vestigial like family member 4

Gene Aliases:

 VGL-4

Location:

 Chr.3:11556067-11720768 on Build GRCh38

Assay Gene Location:

 Within Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
VGLL4 NM_001128219.2 5 2613 NP_001121691.1
NM_001128220.2 4 1988 NP_001121692.1
NM_001128221.2 4 2202 NP_001121693.1
NM_001284390.1 7 2657 NP_001271319.1
NM_001284391.1 5 2330 NP_001271320.1
NM_014667.3 6 2524 NP_055482.2
XM_011534267.2 7 2299 XP_011532569.1
XM_011534268.1 5 2627 XP_011532570.1
XM_011534269.1 5 2321 XP_011532571.1
XM_017007541.1 7 2322 XP_016863030.1
XM_017007542.1 6 2511 XP_016863031.1
AK126479.1 2 3247
AK130542.1 6 2319 BAC85375.1
D50911.3 6 2272

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv955314 Chr.3:11552827 - 11568726 on Build GRCh38 Deletion ATG7 VGLL4
nsv436362 Chr.3:10048344 - 11860564 on Build GRCh38 Deletion SLC6A11 IRAK2 ATP2B2 GHRLOS GHRL HRH1 LINC00852 FANCD2 LINC00606 ATG7 VHL TATDN2 ATP2B2-IT2 TAMM41 VGLL4 BRK1 SEC13 MIR378B SLC6A1-AS1 LOC101927467 MIR885 FANCD2OS SLC6A1
nsv517831 Chr.3:11541780 - 11576994 on Build GRCh38 Loss ATG7 VGLL4
esv2677845 Chr.3:11489013 - 11864643 on Build GRCh38 Deletion ATG7 TAMM41 VGLL4
dgv762e201 Chr.3:10008967 - 11913136 on Build GRCh38 Deletion SLC6A11 IRAK2 ATP2B2 CIDECP GHRL FANCD2 LINC00606 ATG7 VHL TATDN2 ATP2B2-IT2 VGLL4 FANCD2OS EMC3 SLC6A1 GHRLOS HRH1 LINC00852 LOC401052 FANCD2P2 TAMM41 BRK1 SEC13 MIR378B SLC6A1-AS1 LOC101927467 MIR885
nsv1121603 Chr.3:10071433 - 11889279 on Build GRCh38 Deletion SLC6A11 IRAK2 ATP2B2 GHRLOS GHRL HRH1 LINC00852 FANCD2 FANCD2P2 LINC00606 ATG7 VHL TATDN2 ATP2B2-IT2 TAMM41 VGLL4 BRK1 SEC13 MIR378B SLC6A1-AS1 LOC101927467 MIR885 FANCD2OS SLC6A1
nsv436869 Chr.3:10064456 - 11877985 on Build GRCh38 Insertion SLC6A11 IRAK2 ATP2B2 GHRLOS GHRL HRH1 LINC00852 FANCD2 FANCD2P2 LINC00606 ATG7 VHL TATDN2 ATP2B2-IT2 TAMM41 VGLL4 BRK1 SEC13 MIR378B SLC6A1-AS1 LOC101927467 MIR885 FANCD2OS SLC6A1
nsv1073204 Chr.3:9996548 - 11875005 on Build GRCh38 Deletion SLC6A11 IRAK2 ATP2B2 CIDECP GHRL FANCD2 LINC00606 ATG7 VHL TATDN2 ATP2B2-IT2 VGLL4 FANCD2OS EMC3 SLC6A1 GHRLOS HRH1 LINC00852 EMC3-AS1 LOC401052 FANCD2P2 TAMM41 BRK1 SEC13 MIR378B SLC6A1-AS1 LOC101927467 MIR885

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