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See other LRRC56 CNV Assays ›
Gene Symbol
LRRC56
Assay Reference Genome
Location

Chr.11:538623 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01184802_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 115399

Gene Name:

 leucine rich repeat containing 56

Gene Aliases:

 -

Location:

 Chr.11:518967-554916 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LRRC56 NM_198075.3 NP_932341.1
XM_005252775.2 XP_005252832.1
XM_005252776.2 XP_005252833.1
XM_006718132.2 2 1006 XP_006718195.1
XM_011519875.2 XP_011518177.1
XM_011519876.1 XP_011518178.1
XM_011519877.2 XP_011518179.1
XM_017017167.1 3 421 XP_016872656.1
XM_017017168.1 3 660 XP_016872657.1
AK024495.1 BAB15785.1
BC035937.1 AAH35937.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552854 Chr.11:511805 - 619789 on Build GRCh38 Loss MIR210HG LRRC56 CDHR5 RASSF7 LOC101059906 HRAS LOC143666 MIR210 IRF7 LMNTD2 PHRF1
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss SIGIRR PTDSS2 RNH1 RASSF7 IFITM1 B4GALNT4 PGGHG LOC101059906 HRAS ANO9 MIR210 IRF7 IFITM5 MIR210HG LRRC56 IFITM3 PKP3 CDHR5 IFITM2 LOC143666 LMNTD2 PHRF1
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion MIR210HG LRRC56 CDHR5 RASSF7 LOC101059906 SCT HRAS LOC143666 MIR210 IRF7 LMNTD2 PHRF1
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss MUC2 CHID1 PTDSS2 B4GALNT4 LOC101059906 SCT HRAS ANO9 MIR210 IRF7 CEND1 TALDO1 DEAF1 TOLLIP MIR210HG SLC25A22 LOC101927503 EPS8L2 CRACR2B MUC5B RPLP2 MUC5AC LOC143666 PHRF1 PANO1 POLR2L PNPLA2 SNORA52 MIR6744 PDDC1 SIGIRR RNH1 RASSF7 PIDD1 LOC171391 AP2A2 DRD4 LRRC56 PKP3 CDHR5 TMEM80 TSPAN4 MUC6 LMNTD2 CD151
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss MUC2 CHID1 PTDSS2 LOC101059906 SCT HRAS ANO9 MIR210 IRF7 CEND1 TALDO1 DEAF1 TOLLIP MIR210HG SLC25A22 LOC101927503 EPS8L2 CRACR2B MUC5B RPLP2 MUC5AC LOC143666 PHRF1 PANO1 POLR2L PNPLA2 SNORA52 MIR6744 PDDC1 SIGIRR RNH1 RASSF7 PIDD1 LOC171391 AP2A2 DRD4 LRRC56 CDHR5 TMEM80 TOLLIP-AS1 TSPAN4 MUC6 LMNTD2 CD151
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain RASSF7 SCT HRAS MIR210 DRD4 IRF7 DEAF1 MIR210HG LRRC56 CDHR5 LOC143666 LMNTD2 PHRF1
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion CHID1 PTDSS2 B4GALNT4 LOC101059906 SCT HRAS ANO9 MIR210 IRF7 CEND1 TALDO1 DEAF1 MIR210HG SLC25A22 EPS8L2 CRACR2B RPLP2 LOC143666 PHRF1 PANO1 POLR2L PNPLA2 SNORA52 PDDC1 SIGIRR RNH1 RASSF7 PIDD1 LOC171391 AP2A2 DRD4 LRRC56 PKP3 CDHR5 TMEM80 TSPAN4 LMNTD2 CD151
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain PTDSS2 RNH1 RASSF7 LOC101059906 SCT HRAS MIR210 DRD4 IRF7 DEAF1 MIR210HG LRRC56 CDHR5 LOC143666 LMNTD2 PHRF1
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion CHID1 PTDSS2 LOC101059906 SCT HRAS MIR210 IRF7 CEND1 TALDO1 DEAF1 MIR210HG SLC25A22 EPS8L2 CRACR2B RPLP2 LOC143666 PHRF1 PANO1 POLR2L PNPLA2 SNORA52 PDDC1 RNH1 RASSF7 PIDD1 LOC171391 DRD4 LRRC56 CDHR5 TMEM80 TSPAN4 LMNTD2 CD151
nsv552855 Chr.11:532923 - 545087 on Build GRCh38 Loss LRRC56 HRAS

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

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