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See other HAGH CNV Assays ›
Gene Symbol
HAGH
Assay Reference Genome
Location

Chr.16:1823025 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01191547_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 3029

Gene Name:

 hydroxyacylglutathione hydrolase

Gene Aliases:

 GLO2, GLX2, GLXII, HAGH1

Location:

 Chr.16:1809099-1827194 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
HAGH NM_001040427.1 NP_001035517.1
NM_001286249.1 NP_001273178.1
NM_005326.4 NP_005317.2
XM_011522469.2 XP_011520771.1
XM_011522470.2 XP_011520772.1
XM_017023195.1 XP_016878684.1
AK290155.1
AK298174.1
AK299173.1
AK299993.1
AK308825.1
BC000840.1 AAH00840.1
BC002627.2
BG703401.1
BI758286.1
BU176541.1
DB502986.1
DR006636.1
X90999.1 CAA62483.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv517196 Chr.16:1729694 - 1844960 on Build GRCh38 Gain+Loss HAGH IGFALS MEIOB NME3 NUBP2 MIR3177 SPSB3 MAPK8IP3 EME2 FAHD1 MRPS34
dgv4857n54 Chr.16:1806439 - 1855005 on Build GRCh38 Loss HAGH MEIOB FAHD1
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication AXIN1 TBL3 NUBP2 MIR3177 MIR3677 RHOT2 NDUFB10 PRSS29P HBA2 SNHG19 LOC107984876 KCTD5 WFIKKN1 CRAMP1 HBA1 TELO2 TRAF7 ERVK13-1 C16orf91 FAHD1 LINC00235 RPL3L CCDC78 NME4 PKD1 C1QTNF8 EME2 MRPL28 FAM173A LOC105371184 PIGQ MIR940 PDIA2 MIR6511B1 SNHG9 HBQ1 LUC7L WDR24 PRSS27 METTL26 DECR2 CLCN7 UNKL HN1L SSTR5-AS1 RAB40C MRPS34 ATP6V0C ECI1 NHLRC4 WASIR2 GNPTG HAGHL CACNA1H SLC9A3R2 PRR25 LOC105371038 TBC1D24 TSR3 FAM234A MEIOB JMJD8 IFT140 UBE2I METRN PDPK1 MIR5587 GFER PRR35 SNORA10 E4F1 TMEM8A NPW CEMP1 CAPN15 NME3 PGP CASKIN1 SOX8 CHTF18 DDX11L10 MIR3180-5 LOC105371045 NTHL1 RAB26 RHBDF1 HS3ST6 WDR90 LMF1-AS1 TPSAB1 MCRIP2 LOC107987233 LMF1 POLR3K SNORA78 CCDC154 RHBDL1 TPSD1 LOC100287175 ABCA17P NTN3 CCNF DNASE1L2 RPS2 BRICD5 LOC105371046 MIR1225 TSC2 MAPK8IP3 ZNF598 LOC105371049 RGS11 AMDHD2 LOC105371047 LOC729652 MIR6768 IGFALS MIR4516 MIR662 SNORA64 SSTR5 MSRB1 MIR6767 RNF151 RPUSD1 MIR3178 LINC00254 RAB11FIP3 RNPS1 FLJ42627 MIR6859-4 LOC100134368 MPG MIR4717 SYNGR3 FBXL16 HBM C16orf59 HBZ BAIAP3 NOXO1 TPSG1 SNRNP25 LOC652276 NARFL HAGH RPL23AP5 NPRL3 MSLN STUB1 SPSB3 GNG13 ABCA3 ARHGDIG PTX4 MLST8 SNORD60 LOC101929280 LOC106660606 TPSB2 TMEM204 MIR3176
nsv1040440 Chr.16:1811739 - 1866102 on Build GRCh38 Gain HAGH MEIOB FAHD1
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss HAGH MEIOB IFT140 LOC105371046 NUBP2 MIR3177 SPSB3 HN1L MAPK8IP3 EME2 LOC105371047 MRPS34 IGFALS NME3 CRAMP1 TELO2 FAHD1 TMEM204
nsv518641 Chr.16:1645775 - 1835631 on Build GRCh38 Loss HAGH MEIOB NUBP2 MIR3177 SPSB3 HN1L MAPK8IP3 EME2 MRPS34 IGFALS NME3 CRAMP1 FAHD1
nsv1042986 Chr.16:1784723 - 1866102 on Build GRCh38 Loss HAGH IGFALS MEIOB NUBP2 FAHD1
nsv952900 Chr.16:1724500 - 1827999 on Build GRCh38 Deletion HAGH IGFALS NME3 NUBP2 MIR3177 SPSB3 MAPK8IP3 EME2 FAHD1 MRPS34
nsv457337 Chr.16:1813519 - 1855005 on Build GRCh38 Loss HAGH MEIOB FAHD1
dgv335n27 Chr.16:1817039 - 1897015 on Build GRCh38 Gain HAGH LINC00254 MEIOB FAHD1

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