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See other HAGH CNV Assays ›
Gene Symbol
HAGH
Assay Reference Genome
Location

Chr.16:1823025 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01191547_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 3029

Gene Name:

 hydroxyacylglutathione hydrolase

Gene Aliases:

 GLO2, GLX2, GLXII, HAGH1

Location:

 Chr.16:1809099-1827194 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
HAGH NM_001040427.1 NP_001035517.1
NM_001286249.1 NP_001273178.1
NM_005326.4 NP_005317.2
XM_011522469.2 XP_011520771.1
XM_011522470.2 XP_011520772.1
XM_017023195.1 XP_016878684.1
AK290155.1
AK298174.1
AK299173.1
AK299993.1
AK308825.1
BC000840.1 AAH00840.1
BC002627.2
BG703401.1
BI758286.1
BU176541.1
DB502986.1
DR006636.1
X90999.1 CAA62483.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv517196 Chr.16:1729694 - 1844960 on Build GRCh38 Gain+Loss MIR3177 IGFALS NUBP2 MRPS34 EME2 SPSB3 FAHD1 MAPK8IP3 NME3 HAGH MEIOB
nsv571175 Chr.16:1806439 - 1875278 on Build GRCh38 Loss FAHD1 HAGH MEIOB
nsv1040440 Chr.16:1811739 - 1866102 on Build GRCh38 Gain FAHD1 HAGH MEIOB
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication LMF1 PTX4 MIR4516 MCRIP2 MIR3677 RPS2 FAHD1 MAPK8IP3 ATP6V0C HBZ MSRB1 MEIOB DECR2 KCTD5 MRPS34 UBE2I SPSB3 RHBDL1 DNASE1L2 HBA2 MRPL28 GFER SNORA10 CRAMP1 IFT140 MPG MIR6859-4 MIR1225 SNORA78 FAM173A CLCN7 WASIR2 FAM234A LMF1-AS1 SNHG9 RHOT2 METTL26 UNKL NPRL3 TMEM8A BAIAP3 MIR3178 RNPS1 SNORA64 MIR940 STUB1 RAB26 IGFALS AXIN1 SOX8 TPSD1 SSTR5-AS1 PDPK1 SNRNP25 NARFL SSTR5 RPL3L HBM MLST8 SNHG19 LOC105371045 PRR25 PDIA2 HS3ST6 RAB40C WFIKKN1 LOC105371046 RGS11 PGP LOC107987233 CCDC154 MIR6511B1 CHTF18 CASKIN1 HN1L WDR24 NUBP2 NTHL1 NME3 LINC00254 PKD1 MIR6767 DDX11L10 TPSB2 FBXL16 HBQ1 HBA1 EME2 NME4 E4F1 ECI1 TPSG1 TPSAB1 ABCA17P HAGH PRSS29P MIR662 SYNGR3 MIR3177 SNORD60 PRSS27 RAB11FIP3 LINC00235 MIR6768 JMJD8 FLJ42627 GNG13 NTN3 RPL23AP5 TMEM204 C1QTNF8 MIR5587 LOC107984876 C16orf59 BRICD5 LOC652276 CCNF NHLRC4 TSC2 MIR4717 RNF151 LOC105371184 RPUSD1 SLC9A3R2 WDR90 GNPTG LOC105371049 LOC729652 MSLN C16orf91 PIGQ TBL3 LOC106660606 CAPN15 ZNF598 TRAF7 METRN LOC105371047 LOC100134368 CCDC78 MIR3180-5 MIR3176 NOXO1 POLR3K NDUFB10 ERVK13-1 ARHGDIG TBC1D24 AMDHD2 CACNA1H ABCA3 LOC105371038 LOC101929280 PRR35 TSR3 LUC7L NPW LOC100287175 CEMP1 RHBDF1 TELO2 HAGHL
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss LOC105371047 MIR3177 HN1L NUBP2 FAHD1 MAPK8IP3 NME3 CRAMP1 MEIOB IFT140 TMEM204 IGFALS MRPS34 EME2 SPSB3 LOC105371046 HAGH TELO2
nsv1042986 Chr.16:1784723 - 1866102 on Build GRCh38 Loss IGFALS NUBP2 FAHD1 HAGH MEIOB
nsv518641 Chr.16:1645775 - 1835631 on Build GRCh38 Loss MIR3177 HN1L NUBP2 FAHD1 MAPK8IP3 NME3 CRAMP1 MEIOB IGFALS MRPS34 EME2 SPSB3 HAGH
nsv457337 Chr.16:1813519 - 1855005 on Build GRCh38 Loss FAHD1 HAGH MEIOB
nsv952900 Chr.16:1724500 - 1827999 on Build GRCh38 Deletion MIR3177 IGFALS NUBP2 MRPS34 EME2 SPSB3 FAHD1 MAPK8IP3 NME3 HAGH
nsv571177 Chr.16:1817039 - 1897015 on Build GRCh38 Gain FAHD1 LINC00254 HAGH MEIOB

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