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See other ACAP3 CNV Assays ›
Gene Symbol
ACAP3
Assay Reference Genome
Location

Chr.1:1296561 on build GRCh38
Cytoband
1p36.33
Assay ID Hs01193501_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 116983

Gene Name:

 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3

Gene Aliases:

 CENTB5

Location:

 Chr.1:1292384-1307925 on Build GRCh38

Assay Gene Location:

 Within Exon 16
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ACAP3 NM_030649.2 15 1275 NP_085152.2
XM_005244715.2 15 1311 XP_005244772.1
XM_005244717.3 3 269 XP_005244774.1
XM_011540606.2 15 1324 XP_011538908.1
XM_011540607.1 15 3748 XP_011538909.1
XM_011540608.2 14 1229 XP_011538910.1
XM_011540609.2 15 1325 XP_011538911.1
XM_017000233.1 15 1464 XP_016855722.1
AB051503.1 14 2940 BAB21807.1
AF411981.1 13 1075 AAL04165.1
AK093954.1 BAC04257.1
BC051194.1 15 1275 AAH51194.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv817616 Chr.1:1257135 - 1306704 on Build GRCh38 Loss UBE2J2 MIR6726 SCNN1D ACAP3
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss MRPL20 DDX11L1 B3GALT6 TMEM88B TTLL10 CDK11A MTND1P23 CCNL2 TAS1R3 VWA1 SLC35E2B UBE2J2 PLEKHN1 FAM138A PERM1 WASH7P MIR429 NADK MTND2P28 LINC01128 TTLL10-AS1 CALML6 LOC729737 PUSL1 FAAP20 LOC100288069 LOC100506504 ATAD3A LOC105378591 MIR1302-2 MIR6808 SLC35E2 FNDC10 OR4F5 TMEM52 PRKCZ LOC100130417 LOC100134822 CDK11B LOC107984841 MIB2 LOC105378592 KLHL17 ACAP3 LOC105378947 GNB1 MMP23A AURKAIP1 ANKRD65 TNFRSF4 MIR6723 OR4F29 LOC148413 LOC107985729 MMP23B CPTP LOC100132287 TNFRSF18 C1orf159 LOC102725121 RNF223 LOC100133331 FAM41C LOC284600 LOC105378949 CPSF3L LOC107985728 MIR6859-2 ATAD3B LOC105378589 FAM132A LOC102724312 AGRN SDF4 MIR6727 SSU72 SAMD11 LINC00115 FAM87B LOC100129534 HES4 LOC100287934 MIR200B MIR200A ATAD3C OR4F16 TMEM240 SKI GABRD CFAP74 MORN1 LOC101928626 MIR6726 SCNN1D LINC01342 ISG15 DVL1 NOC2L LOC105378948 MXRA8 LOC100288175 MIR6859-1
nsv544965 Chr.1:1217251 - 1306704 on Build GRCh38 Loss SDF4 UBE2J2 FAM132A B3GALT6 MIR6726 SCNN1D ACAP3
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss CPSF3L MIR6727 DVL1 CPTP TAS1R3 MIR6808 MIR6726 ACAP3 PUSL1
dgv25n54 Chr.1:1290683 - 1306366 on Build GRCh38 Loss MIR6726 SCNN1D ACAP3
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss TNFRSF18 SDF4 UBE2J2 TNFRSF4 C1orf159 RNF223 B3GALT6 MIR6726 SCNN1D LINC01342 MIR200B MIR429 TTLL10 ACAP3 FAM132A TTLL10-AS1 MIR200A
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication SDF4 MIR6727 TNFRSF4 B3GALT6 MIR200B TTLL10 CPTP MIR200A TAS1R3 TNFRSF18 UBE2J2 C1orf159 RNF223 MIR6726 SCNN1D LINC01342 MIR429 ACAP3 CPSF3L FAM132A TTLL10-AS1 LOC105378948 AGRN LOC100288175 PUSL1
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion CPSF3L MIR6727 DVL1 CPTP TAS1R3 MIR6808 MIR6726 SCNN1D MXRA8 AURKAIP1 ACAP3 PUSL1
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss MRPL20 TNFRSF4 B3GALT6 TMEM88B LOC148413 TTLL10 CDK11A LOC107985729 MMP23B CCNL2 CPTP TAS1R3 VWA1 SLC35E2B TNFRSF18 UBE2J2 PLEKHN1 PERM1 C1orf159 RNF223 FAM41C LOC284600 MIR429 NADK CPSF3L LOC107985728 ATAD3B LINC01128 FAM132A TTLL10-AS1 LOC102724312 AGRN PUSL1 SDF4 MIR6727 SSU72 SAMD11 LINC00115 LOC100288069 FAM87B ATAD3A MIR6808 HES4 LOC100287934 MIR200B SLC35E2 FNDC10 MIR200A ATAD3C LOC100130417 CDK11B TMEM240 MIB2 KLHL17 MIR6726 SCNN1D LINC01342 ISG15 ACAP3 DVL1 NOC2L LOC105378948 MXRA8 LOC100288175 MMP23A AURKAIP1 ANKRD65
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion SDF4 MIR6727 SSU72 MRPL20 TNFRSF4 ATAD3A B3GALT6 TMEM88B MIR6808 LOC148413 MIR200B TTLL10 FNDC10 LOC107985729 MMP23B CCNL2 CPTP MIR200A ATAD3C TAS1R3 CDK11B VWA1 TMEM240 MIB2 TNFRSF18 UBE2J2 C1orf159 MIR6726 SCNN1D LINC01342 MIR429 ACAP3 CPSF3L DVL1 ATAD3B FAM132A TTLL10-AS1 LOC102724312 MXRA8 AURKAIP1 ANKRD65 PUSL1
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain CPSF3L MIR6727 DVL1 CPTP TAS1R3 MIR6808 MIR6726 SCNN1D MXRA8 ACAP3 PUSL1
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss UBE2J2 MIR6727 MIR6808 MIR6726 SCNN1D ACAP3 CPSF3L DVL1 CPTP TAS1R3 MXRA8 AURKAIP1 PUSL1
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain SDF4 MIR6727 MRPL20 SAMD11 TNFRSF4 B3GALT6 TMEM88B MIR6808 HES4 LOC148413 MIR200B TTLL10 CCNL2 CPTP MIR200A LOC100130417 TAS1R3 TNFRSF18 UBE2J2 PLEKHN1 PERM1 C1orf159 RNF223 KLHL17 MIR6726 SCNN1D LINC01342 LOC284600 MIR429 ISG15 ACAP3 CPSF3L LOC107985728 DVL1 FAM132A TTLL10-AS1 NOC2L LOC105378948 AGRN MXRA8 LOC100288175 AURKAIP1 ANKRD65 PUSL1
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain TNFRSF18 SDF4 UBE2J2 MIR6727 TNFRSF4 B3GALT6 MIR6726 SCNN1D MIR200B MIR429 TTLL10 ACAP3 CPSF3L FAM132A TTLL10-AS1 MIR200A PUSL1

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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