Hs01196022_cn

• Gene Symbol: TRMT1L
• Assay Reference Genome Location: Chr.1:185118644 on build GRCh38
• Cytoband: 1q25.3

Target Gene Details

• Entrez Gene ID: 81627
• Gene Name: tRNA methyltransferase 1 like
• Gene Aliases: C1orf25, MST070, MSTP070, TRM1L, bG120K12.3
• Location: Chr.1:185118085-185157098 on Build GRCh38
• Assay Gene Location: Within Exon 16

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TRMT1L	NM_001202423.1	15	3457	NP_001189352.1
	NM_030934.4	15	3849	NP_112196.3
	XM_011510028.2	15	5286	XP_011508330.1
	AF288399.1	15	3771	AAG60618.1
	AK027418.1	2	1679
	AK131460.1	15	4556	BAD18605.1
	AK226103.1	15	3564
	BU198525.1	1	86

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv548396	Chr.1:185068972 - 185182246 on Build GRCh38	Loss	RNF2 SWT1 TRMT1L
nsv521613	Chr.1:185102699 - 185202737 on Build GRCh38	Loss	SWT1 TRMT1L

More Information

Additional Information:

For this assay, SNP(s) [rs74552148] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA methyltransferase

Gene Ontology Categories:

Process(es)

tRNA N2-guanine methylation
behavior

Function(s)

tRNA binding
tRNA (guanine-N2-)-methyltransferase activity
poly(A) RNA binding
metal ion binding