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See other CDHR5 CNV Assays ›
Gene Symbol
CDHR5
Assay Reference Genome
Location

Chr.11:617464 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01203591_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 53841

Gene Name:

 cadherin related family member 5

Gene Aliases:

 MLPCDH, MU-PCDH, MUCDHL, MUPCDH

Location:

 Chr.11:616565-625067 on Build GRCh38

Assay Gene Location:

 Within Exon 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDHR5 NM_001171968.1 15 2572 NP_001165439.1
NM_021924.4 15 2590 NP_068743.2
NM_031264.3 14 2008 NP_112554.2
XM_006718253.3 15 2250 XP_006718316.1
XM_011520188.2 15 2157 XP_011518490.1
XM_011520189.2 15 2064 XP_011518491.1
XM_011520190.2 13 1823 XP_011518492.1
AF258675.1 AAG16732.1
AF258676.1 16 2746 AAG16733.1
AF276242.1 14 1843 AAG30821.1
AF301909.1 15 2425 AAG33495.1
AI640262.1 1 228
AK000226.1 15 2608 BAA91021.1
AK000384.1 14 1913 BAA91130.1
AK025012.1 8 1578 BAB15052.1
AK300991.1 15 1860
AK308040.1 15 2514
AY358368.1 15 2429 AAQ88734.1
BC038405.1 14 1865 AAH38405.1
DQ491193.1 14 1915

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion PHRF1 RASSF7 LMNTD2 MIR210 SCT LOC101059906 MIR210HG CDHR5 LRRC56 IRF7 LOC143666 HRAS
nsv552861 Chr.11:589246 - 662407 on Build GRCh38 Loss PHRF1 SCT CDHR5 IRF7 DRD4 DEAF1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss PHRF1 RASSF7 LOC101927503 MIR210 LOC101059906 RPLP2 SNORA52 TOLLIP-AS1 MUC5B EPS8L2 CEND1 TALDO1 LOC171391 RNH1 LMNTD2 SCT MIR210HG POLR2L DEAF1 SIGIRR PTDSS2 PNPLA2 CDHR5 MUC2 LRRC56 IRF7 CHID1 TMEM80 HRAS PDDC1 AP2A2 MIR6744 PIDD1 SLC25A22 CRACR2B TOLLIP MUC5AC MUC6 ANO9 TSPAN4 DRD4 CD151 PANO1 LOC143666
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain PHRF1 RASSF7 MIR210 CDHR5 LRRC56 IRF7 HRAS LMNTD2 SCT MIR210HG DRD4 LOC143666 DEAF1
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain PHRF1 RASSF7 PTDSS2 MIR210 LOC101059906 CDHR5 LRRC56 IRF7 HRAS RNH1 LMNTD2 SCT MIR210HG DRD4 LOC143666 DEAF1
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion PHRF1 RASSF7 MIR210 B4GALNT4 LOC101059906 RPLP2 SNORA52 EPS8L2 CEND1 TALDO1 LOC171391 PKP3 RNH1 LMNTD2 SCT MIR210HG POLR2L DEAF1 SIGIRR PTDSS2 PNPLA2 CDHR5 LRRC56 IRF7 CHID1 TMEM80 HRAS PDDC1 AP2A2 PIDD1 SLC25A22 CRACR2B ANO9 TSPAN4 DRD4 CD151 PANO1 LOC143666
dgv1524n54 Chr.11:610277 - 619789 on Build GRCh38 Loss PHRF1 CDHR5 IRF7
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion PHRF1 RASSF7 MIR210 LOC101059906 RPLP2 SNORA52 EPS8L2 CEND1 TALDO1 LOC171391 RNH1 LMNTD2 SCT MIR210HG POLR2L DEAF1 PTDSS2 PNPLA2 CDHR5 LRRC56 IRF7 CHID1 TMEM80 HRAS PDDC1 PIDD1 SLC25A22 CRACR2B TSPAN4 DRD4 CD151 PANO1 LOC143666
nsv552856 Chr.11:549119 - 619789 on Build GRCh38 Gain PHRF1 RASSF7 LMNTD2 MIR210 MIR210HG CDHR5 LRRC56 IRF7 LOC143666
nsv552865 Chr.11:612843 - 626730 on Build GRCh38 Loss SCT CDHR5 IRF7
dgv1522n54 Chr.11:557342 - 656845 on Build GRCh38 Loss PHRF1 RASSF7 LMNTD2 MIR210 SCT MIR210HG CDHR5 IRF7 DRD4 LOC143666 DEAF1
nsv467634 Chr.11:511805 - 619789 on Build GRCh38 Loss PHRF1 RASSF7 LMNTD2 MIR210 LOC101059906 MIR210HG CDHR5 LRRC56 IRF7 LOC143666 HRAS
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss SIGIRR PHRF1 RASSF7 PTDSS2 MIR210 IFITM3 B4GALNT4 LOC101059906 CDHR5 LRRC56 IRF7 PGGHG HRAS IFITM5 PKP3 RNH1 IFITM1 LMNTD2 IFITM2 ANO9 MIR210HG LOC143666
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss PHRF1 RASSF7 LOC101927503 MIR210 B4GALNT4 LOC101059906 RPLP2 SNORA52 MUC5B EPS8L2 CEND1 TALDO1 LOC171391 PKP3 RNH1 LMNTD2 SCT MIR210HG POLR2L DEAF1 SIGIRR PTDSS2 PNPLA2 CDHR5 MUC2 LRRC56 IRF7 CHID1 TMEM80 HRAS PDDC1 AP2A2 MIR6744 PIDD1 SLC25A22 CRACR2B TOLLIP MUC5AC MUC6 ANO9 TSPAN4 DRD4 CD151 PANO1 LOC143666
nsv552862 Chr.11:605856 - 619789 on Build GRCh38 Loss PHRF1 CDHR5 IRF7
esv2762889 Chr.11:606294 - 653614 on Build GRCh38 Loss PHRF1 SCT CDHR5 IRF7 DRD4 DEAF1
nsv528415 Chr.11:558884 - 620599 on Build GRCh38 Loss PHRF1 RASSF7 LMNTD2 MIR210 MIR210HG CDHR5 IRF7 LOC143666

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