accessibility menu, dialog, popup

UserName
Viewing profile as user:

Please enter the information below and press OK to send your cart to Core Services for purchase.

    

System Message

OKCancel
LOADING ...
See other EGFL8 CNV Assays ›
Gene Symbol
EGFL8
Assay Reference Genome
Location

Chr.6:32168063 on build GRCh38
Cytoband
6p21.32
Assay ID Hs01219303_cn
Size
Availability Made To Order
Catalog # 4400291
Price
Your Price
Online offer:
Check your price ›

Assay Details

Target Gene Details

Entrez Gene ID:

 80864

Gene Name:

 EGF like domain multiple 8

Gene Aliases:

 C6orf8, NG3

Location:

 Chr.6:32164605-32168285 on Build GRCh38

Assay Gene Location:

 Within Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
EGFL8 NM_030652.3 9 1070 NP_085155.1
NR_037860.1 9 1094
AB190520.1 8 1008 BAD51398.1
AK126457.1 6 2226
AY358139.1 9 1055 AAQ88506.1
BC035574.1 9 1047 AAH35574.1
BC052591.1 9 1094 AAH52591.1

Target Gene Details

Entrez Gene ID:

 100532746

Gene Name:

 PPT2-EGFL8 readthrough (NMD candidate)

Gene Aliases:

 -

Location:

 Chr.6:32153999-32168285 on Build GRCh38

Assay Gene Location:

 Within Exon 16
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PPT2-EGFL8 NR_037861.1 16 2506
AB209572.1 5 2180 BAD92809.1
AF020544.1 16 2660 AAB80731.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv830629 Chr.6:32076201 - 32222010 on Build GRCh38 Loss PPT2-EGFL8 RNF5 MIR6833 TNXB AGPAT1 NOTCH4 ATF6B PPT2 EGFL8 GPSM3 FKBPL AGER PRRT1 MIR6721 LOC100507547 PBX2
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss CFB CYP21A2 CYP21A1P NOTCH4 PPT2 EGFL8 BTNL2 HSPA1B LOC100507547 C2 TNXA HLA-DQB1-AS1 HLA-DQB1 STK19 C4B TNXB NEU1 AGPAT1 DXO HLA-DRB1 EHMT2 C6orf48 HLA-DRB5 HSPA1A SNORD48 RNF5 SNORD52 MIR6833 HLA-DQA1 SLC44A4 ZBTB12 GPSM3 FKBPL C4A HCG23 MIR1236 MIR6721 PBX2 PPT2-EGFL8 C6orf10 C2-AS1 NELFE HLA-DRA ATF6B LOC101929163 HLA-DRB6 AGER PRRT1 SKIV2L
dgv10472n54 Chr.6:31985690 - 32812026 on Build GRCh38 Loss RNF5 MIR6833 CYP21A2 CYP21A1P HLA-DQA1 NOTCH4 PPT2 EGFL8 HLA-DQA2 GPSM3 FKBPL C4A HCG23 BTNL2 MIR3135B MIR6721 LOC100507547 PBX2 TNXA HLA-DQB1-AS1 HLA-DQB1 PPT2-EGFL8 C6orf10 C4B TNXB HLA-DRA AGPAT1 ATF6B LOC101929163 HLA-DQB2 HLA-DRB6 HLA-DRB1 AGER PRRT1 HLA-DRB5
esv2759415 Chr.6:31903735 - 32241336 on Build GRCh38 Gain+Loss CFB RNF5 MIR6833 CYP21A2 CYP21A1P NOTCH4 PPT2 EGFL8 GPSM3 FKBPL C4A MIR1236 MIR6721 LOC100507547 C2 PBX2 TNXA PPT2-EGFL8 STK19 C4B C2-AS1 TNXB NELFE AGPAT1 DXO ATF6B AGER PRRT1 SKIV2L
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion CFB CYP21A2 CYP21A1P LY6G6F NOTCH4 TNF PPT2 EGFL8 DDAH2 DDX39B-AS1 BTNL2 SAPCD1 HSPA1B LY6G6D MCCD1 ATP6V1G2-DDX39B LOC100507547 LOC102725068 C2 TNXA PRRC2A DDX39B SNORD84 STK19 C4B TNXB LY6G5B CLIC1 LTA NEU1 AGPAT1 DXO LY6G6E GPANK1 NCR3 CSNK2B HLA-DRB1 LY6G6C EHMT2 C6orf48 HLA-DRB5 LST1 HSPA1A SNORD48 VWA7 RNF5 SNORD52 MIR6833 SLC44A4 BAG6 HCG26 LSM2 LY6G5C ZBTB12 SAPCD1-AS1 GPSM3 FKBPL C4A HCG23 MSH5-SAPCD1 MIR1236 MIR6721 MICB SNORA38 MIR4646 PBX2 PPT2-EGFL8 C6orf10 ABHD16A HCP5 LTB C2-AS1 NELFE SNORD117 HLA-DRA MIR6832 ATF6B C6orf47 MSH5 LOC101929163 HSPA1L LOC100287329 HLA-DRB6 AIF1 VARS AGER C6orf25 APOM PRRT1 ATP6V1G2 SKIV2L NFKBIL1
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion LOC100294145 CFB CYP21A2 CYP21A1P NOTCH4 HLA-DQA2 ZBTB9 DDX39B-AS1 BTNL2 MIR3135B HSPA1B LY6G6D MCCD1 ATP6V1G2-DDX39B LOC100507547 LOC102725068 B3GALT4 C2 PRRC2A MIR6834 HLA-DQB1-AS1 HLA-DQB1 STK19 C4B TAP1 LY6G5B AGPAT1 RPS18 LY6G6E GPANK1 CSNK2B HLA-DRB1 LY6G6C EHMT2 HLA-DPA1 HLA-DPB2 HLA-DRB5 HSPA1A SNORD48 PSMB9 VWA7 HLA-DMB BAG6 HCG26 LY6G5C ZBTB12 FKBPL C4A CUTA HCG23 MSH5-SAPCD1 MIR1236 SNORA38 PSMB8-AS1 PPT2-EGFL8 WDR46 ABHD16A HCP5 LTB SNORD117 HLA-DRA MIR6873 C6orf47 LOC101929163 LOC100287329 VARS PRRT1 PSMB8 ATP6V1G2 TAP2 TAPBP SYNGAP1 BRD2 LY6G6F TNF PPT2 EGFL8 MIR5004 DDAH2 HCG24 SAPCD1 PHF1 TNXA ZBTB22 DDX39B SNORD84 RGL2 HLA-DOB MIR219A1 TNXB COL11A2 CLIC1 LTA NEU1 HLA-DOA DXO HLA-DQB2 HSD17B8 NCR3 C6orf48 KIFC1 SLC39A7 HLA-DMA LST1 DAXX HLA-DPB1 RNF5 SNORD52 MIR6833 HLA-DQA1 SLC44A4 LSM2 SAPCD1-AS1 GPSM3 MIR6721 MICB MIR4646 PBX2 PFDN6 PPP1R2P1 C6orf10 C2-AS1 NELFE MIR6832 ATF6B MSH5 HSPA1L HLA-DRB6 RXRB AIF1 AGER C6orf25 HCG25 VPS52 APOM RING1 SKIV2L NFKBIL1
nsv602104 Chr.6:32096949 - 32203906 on Build GRCh38 Loss PPT2-EGFL8 RNF5 MIR6833 TNXB AGPAT1 NOTCH4 ATF6B PPT2 EGFL8 GPSM3 FKBPL AGER PRRT1 MIR6721 LOC100507547 PBX2
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion LOC100294145 CFB CYP21A2 CYP21A1P NOTCH4 HLA-DQA2 ZBTB9 DDX39B-AS1 BTNL2 MIR3135B HSPA1B LY6G6D MCCD1 ATP6V1G2-DDX39B LOC100507547 LOC102725068 B3GALT4 C2 PRRC2A MIR6834 HLA-DQB1-AS1 HLA-DQB1 STK19 C4B TAP1 LY6G5B AGPAT1 RPS18 LY6G6E GPANK1 CSNK2B HLA-DRB1 LY6G6C EHMT2 HLA-DPA1 HLA-DPB2 HLA-DRB5 HSPA1A SNORD48 PSMB9 VWA7 HLA-DMB BAG6 HCG26 LY6G5C ZBTB12 FKBPL C4A CUTA HCG23 MSH5-SAPCD1 MIR1236 SNORA38 PSMB8-AS1 PPT2-EGFL8 WDR46 ABHD16A HCP5 LTB SNORD117 HLA-DRA MIR6873 C6orf47 LOC101929163 LOC100287329 VARS PRRT1 PSMB8 ATP6V1G2 TAP2 TAPBP SYNGAP1 BRD2 LY6G6F TNF PPT2 EGFL8 MIR5004 DDAH2 HCG24 SAPCD1 PHF1 TNXA ZBTB22 DDX39B SNORD84 RGL2 HLA-DOB MIR219A1 TNXB COL11A2 CLIC1 LTA NEU1 HLA-DOA DXO HLA-DQB2 HSD17B8 NCR3 C6orf48 KIFC1 SLC39A7 HLA-DMA LST1 DAXX HLA-DPB1 RNF5 SNORD52 MIR6833 HLA-DQA1 SLC44A4 LSM2 SAPCD1-AS1 GPSM3 MIR6721 MICB MIR4646 PBX2 PFDN6 PPP1R2P1 C6orf10 C2-AS1 NELFE MIR6832 ATF6B MSH5 HSPA1L HLA-DRB6 RXRB AIF1 AGER C6orf25 HCG25 VPS52 APOM RING1 SKIV2L NFKBIL1
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss CFB CYP21A2 CYP21A1P LY6G6F NOTCH4 TNF PPT2 EGFL8 DDAH2 DDX39B-AS1 BTNL2 SAPCD1 HSPA1B LY6G6D MCCD1 ATP6V1G2-DDX39B LOC100507547 LOC102725068 C2 TNXA PRRC2A DDX39B SNORD84 STK19 C4B TNXB LY6G5B CLIC1 LTA NEU1 AGPAT1 DXO LY6G6E GPANK1 NCR3 CSNK2B MIR6891 LY6G6C EHMT2 C6orf48 LST1 HSPA1A SNORD48 VWA7 RNF5 SNORD52 MIR6833 SLC44A4 BAG6 HCG26 LSM2 LY6G5C ZBTB12 SAPCD1-AS1 GPSM3 FKBPL C4A HCG23 MSH5-SAPCD1 MIR1236 MIR6721 MICB SNORA38 MIR4646 PBX2 PPT2-EGFL8 C6orf10 ABHD16A HCP5 LTB C2-AS1 NELFE SNORD117 HLA-DRA MIR6832 ATF6B C6orf47 MSH5 LOC101929163 HSPA1L LOC100287329 MICA AIF1 VARS AGER C6orf25 APOM PRRT1 ATP6V1G2 SKIV2L HLA-B NFKBIL1

Back To Top

More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


Back To Top

Related Products