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See other SLC38A3 CNV Assays ›
Gene Symbol
SLC38A3
Assay Reference Genome
Location

Chr.3:50214498 on build GRCh38
Cytoband
3p21.31
Assay ID Hs01226500_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 10991

Gene Name:

 solute carrier family 38 member 3

Gene Aliases:

 G17, NAT1, SN1, SNAT3

Location:

 Chr.3:50205246-50220979 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 4 - Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC38A3 NM_006841.5 NP_006832.1
XM_006712954.2 XP_006713017.1
AF244548.1 AAG15313.1
AK293801.1
AK299677.1
AK313461.1
BC042875.1 AAH42875.1
BP362985.1
BX537382.1 CAD97624.1
CR456970.1 CAG33251.1
U49082.1 AAB47236.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv523560 Chr.3:50134964 - 50314769 on Build GRCh38 Loss SEMA3F MIR566 HYAL3 GNAT1 SLC38A3 LSMEM2 MIR5787 LOC107986035 HYAL1 SEMA3B-AS1 SEMA3B NAT6 GNAI2 IFRD2 SEMA3F-AS1 MIR6872
esv2759148 Chr.3:50161045 - 50333946 on Build GRCh38 Loss SEMA3F MIR566 HYAL3 GNAT1 SLC38A3 LSMEM2 MIR5787 RASSF1 HYAL1 SEMA3B-AS1 SEMA3B HYAL2 NAT6 GNAI2 IFRD2 TUSC2 MIR6872
dgv602n27 Chr.3:50140578 - 50287241 on Build GRCh38 Loss SEMA3F MIR566 SEMA3B-AS1 SEMA3B GNAT1 SLC38A3 LSMEM2 MIR5787 GNAI2 LOC107986035 SEMA3F-AS1 MIR6872
dgv8317n54 Chr.3:50206077 - 50383123 on Build GRCh38 Loss TMEM115 HYAL3 SLC38A3 LSMEM2 MIR5787 RASSF1 CACNA2D2 CYB561D2 HYAL1 SEMA3B-AS1 SEMA3B RASSF1-AS1 HYAL2 ZMYND10 NAT6 GNAI2 IFRD2 NPRL2 TUSC2 MIR6872
nsv834692 Chr.3:50161052 - 50356033 on Build GRCh38 Loss SEMA3F TMEM115 MIR566 HYAL3 GNAT1 SLC38A3 LSMEM2 MIR5787 RASSF1 CYB561D2 HYAL1 SEMA3B-AS1 SEMA3B RASSF1-AS1 HYAL2 ZMYND10 NAT6 GNAI2 IFRD2 NPRL2 TUSC2 MIR6872
nsv515986 Chr.3:50066874 - 50254353 on Build GRCh38 Loss SEMA3F MIR566 RBM5-AS1 RBM5 GNAT1 SLC38A3 MIR5787 RBM6 GNAI2 LOC107986035 SEMA3F-AS1
dgv8316n54 Chr.3:50115923 - 50299991 on Build GRCh38 Loss SEMA3F MIR566 HYAL3 GNAT1 SLC38A3 LSMEM2 MIR5787 LOC107986035 HYAL1 SEMA3B-AS1 SEMA3B RBM5 NAT6 GNAI2 IFRD2 SEMA3F-AS1 MIR6872
nsv834690 Chr.3:50064402 - 50263192 on Build GRCh38 Loss SEMA3F MIR566 RBM5-AS1 RBM5 GNAT1 SLC38A3 MIR5787 RBM6 GNAI2 LOC107986035 SEMA3F-AS1
nsv523662 Chr.3:50107518 - 50547568 on Build GRCh38 Loss SLC38A3 MIR5787 CYB561D2 HYAL1 SEMA3B-AS1 ZMYND10 NPRL2 TUSC2 SEMA3F TMEM115 MIR566 HYAL3 GNAT1 LSMEM2 RASSF1 CACNA2D2 LOC107986035 SEMA3B RBM5 RASSF1-AS1 HYAL2 NAT6 GNAI2 IFRD2 SEMA3F-AS1 MIR6872
nsv470561 Chr.3:50121341 - 50547568 on Build GRCh38 Loss SLC38A3 MIR5787 CYB561D2 HYAL1 SEMA3B-AS1 ZMYND10 NPRL2 TUSC2 SEMA3F TMEM115 MIR566 HYAL3 GNAT1 LSMEM2 RASSF1 CACNA2D2 LOC107986035 SEMA3B RASSF1-AS1 HYAL2 NAT6 GNAI2 IFRD2 SEMA3F-AS1 MIR6872
nsv460531 Chr.3:50210391 - 50399396 on Build GRCh38 Loss TMEM115 HYAL3 SLC38A3 LSMEM2 MIR5787 RASSF1 CACNA2D2 CYB561D2 HYAL1 SEMA3B-AS1 SEMA3B RASSF1-AS1 HYAL2 ZMYND10 NAT6 GNAI2 IFRD2 NPRL2 TUSC2 MIR6872
nsv954855 Chr.3:50152468 - 50439169 on Build GRCh38 Deletion SLC38A3 MIR5787 CYB561D2 HYAL1 SEMA3B-AS1 ZMYND10 NPRL2 TUSC2 SEMA3F TMEM115 MIR566 HYAL3 GNAT1 LSMEM2 RASSF1 CACNA2D2 LOC107986035 SEMA3B RASSF1-AS1 HYAL2 NAT6 GNAI2 IFRD2 SEMA3F-AS1 MIR6872

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