Hs01243091_cn

• Gene Symbol: CTNNA1
• Assay Reference Genome Location: Chr.5:138875245 on build GRCh38
• Cytoband: 5q31.2

Target Gene Details

• Entrez Gene ID: 1495
• Gene Name: catenin alpha 1
• Gene Aliases: CAP102, MDPT2
• Location: Chr.5:138753386-138935034 on Build GRCh38
• Assay Gene Location: Overlaps Intron 9 - Exon 10

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CTNNA1	NM_001290307.2			NP_001277236.1
	NM_001290309.2			NP_001277238.1
	NM_001290310.2			NP_001277239.1
	NM_001290312.1			NP_001277241.1
	NM_001323982.1			NP_001310911.1
	NM_001323983.1			NP_001310912.1
	NM_001323984.1			NP_001310913.1
	NM_001323985.1			NP_001310914.1
	NM_001323986.1			NP_001310915.1
	NM_001323990.1			NP_001310919.1
	NM_001323991.1			NP_001310920.1
	NM_001323993.1			NP_001310922.1
	NM_001323996.1			NP_001310925.1
	NM_001323998.1			NP_001310927.1
	NM_001323999.1			NP_001310928.1
	NM_001324000.1			NP_001310929.1
	NM_001324001.1			NP_001310930.1
	NM_001324002.1			NP_001310931.1
	NM_001324003.1			NP_001310932.1
	NM_001324005.1			NP_001310934.1
	NM_001324007.1			NP_001310936.1
	NM_001324009.1			NP_001310938.1
	NM_001324013.1			NP_001310942.1
	NM_001903.4			NP_001894.2
	AK094151.1
	AK296708.1
	AK300439.1
	AK304267.1
	BC000385.2			AAH00385.1
	D13866.1			BAA02979.1
	D14705.1			BAA03530.1
	DA349847.1
	L23805.1			AAA86430.1
	U03100.1			AAA18949.1

Target Gene Details

• Entrez Gene ID: 26045
• Gene Name: leucine rich repeat transmembrane neuronal 2
• Gene Aliases: -
• Location: Chr.5:138869390-138875368 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LRRTM2	NM_015564.2	1	124	NP_056379.1
	AB007876.1	1	76
	AK291064.1	1	95
	AK297332.1	1	98
	AK309790.1	1	60
	DA400927.1	1	124

More Information

• Set Membership: Intragenic, Exonic, Non-exonic, non-DGV Variation

Panther Classification:

Molecular Function -

non-motor actin binding protein, transmembrane signal receptor

Gene Ontology Categories:

Process(es)

ovarian follicle development
actin filament organization
cell adhesion
establishment or maintenance of cell polarity
negative regulation of neuroblast proliferation
aging
male gonad development
gap junction assembly
axon regeneration
adherens junction organization
cellular protein localization
odontogenesis of dentin-containing tooth
apical junction assembly
response to estrogen
positive regulation of smoothened signaling pathway
positive regulation of muscle cell differentiation
protein heterooligomerization
cellular response to indole-3-methanol
epithelial cell-cell adhesion
negative regulation of cell motility
negative regulation of integrin-mediated signaling pathway
negative regulation of extrinsic apoptotic signaling pathway in absence of ligand
positive regulation of extrinsic apoptotic signaling pathway in absence of ligand
negative regulation of receptor internalization
synapse organization
positive regulation of synapse assembly
long-term synaptic potentiation

Function(s)

structural molecule activity
protein binding
beta-catenin binding
vinculin binding
poly(A) RNA binding
gamma-catenin binding
cadherin binding
actin filament binding
cadherin binding involved in cell-cell adhesion
neurexin family protein binding