Hs01250533_cn

• Gene Symbol: DDX41
• Assay Reference Genome Location: Chr.5:177513058 on build GRCh38
• Cytoband: 5q35.3

Target Gene Details

• Entrez Gene ID: 51428
• Gene Name: DEAD-box helicase 41
• Gene Aliases: ABS, MPLPF
• Location: Chr.5:177511577-177517326 on Build GRCh38
• Assay Gene Location: Overlaps Intron 10 - Exon 11

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
DDX41	NM_001321732.1			NP_001308661.1
	NM_001321830.1			NP_001308759.1
	NM_016222.3			NP_057306.2
	AF195417.1			AAF04150.1
	AK001255.1			BAA91585.1
	AK026117.1
	AK027768.1			BAB55355.1
	AK091545.1
	AK091774.1
	AK092585.1
	AK222598.1			BAD96318.1
	AK315491.1
	AL137455.1			CAB70746.1
	BC015476.1			AAH15476.1
	BX641072.1			CAE46035.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv5147	Chr.5:177511195 - 177556017 on Build GRCh38	Deletion	DDX41 FAM193B
nsv1161311	Chr.5:177305104 - 177546474 on Build GRCh38	Duplication	DBN1 SLC34A1 GRK6 PFN3 FAM193B PDLIM7 PRR7 PRR7-AS1 LMAN2 PRELID1 RGS14 DOK3 DDX41 F12 MXD3

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

mRNA splicing, via spliceosome
apoptotic process
cell proliferation
RNA secondary structure unwinding
cell differentiation
regulation of type I interferon production
positive regulation of type I interferon production
cellular response to interferon-beta
positive regulation of transcription from RNA polymerase II promoter
defense response to virus

Function(s)

DNA binding
ATP-dependent RNA helicase activity
protein binding
ATP binding
poly(A) RNA binding
metal ion binding