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See other SIGIRR CNV Assays ›
Gene Symbol
SIGIRR
Assay Reference Genome
Location

Chr.11:405940 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01256673_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 59307

Gene Name:

 single Ig and TIR domain containing

Gene Aliases:

 IL-1R8, TIR8

Location:

 Chr.11:405716-417454 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SIGIRR NM_001135053.1 10 1446 NP_001128525.1
NM_001135054.1 10 1519 NP_001128526.1
NM_021805.2 10 1415 NP_068577.2
XM_005253044.2 9 1808 XP_005253101.1
XM_005253045.1 9 1704 XP_005253102.1
XM_005253046.1 9 1792 XP_005253103.1
XM_005253048.4 8 1416 XP_005253105.1
XM_017018099.1 10 1726 XP_016873588.1
XM_017018100.1 9 1555 XP_016873589.1
AK025099.1 10 1415 BAB15066.1
AK093427.1 7 1643
AK172830.1 10 1415 BAD18795.1
AY358342.1 8 1581 AAQ88708.1
BC003591.1 9 1345 AAH03591.1
BC025953.1 10 1374 AAH25953.1
BC106007.1 10 1496 AAI06008.1
BX369506.2 5 614
CR457338.1 CAG33619.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss LOC101059906 SIGIRR ANO9 LRRC56 IFITM2 IFITM5 CDHR5 MIR210HG PTDSS2 B4GALNT4 PGGHG IFITM1 PHRF1 IRF7 HRAS LOC143666 PKP3 LMNTD2 RNH1 RASSF7 MIR210 IFITM3
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss POLR2L ANO9 LRRC56 TSPAN4 SCT CDHR5 RPLP2 PANO1 PNPLA2 MUC2 SLC25A22 CRACR2B MIR6744 PIDD1 HRAS EPS8L2 LOC143666 CD151 TOLLIP RASSF7 LOC101927503 LOC171391 LOC101059906 MUC5AC PDDC1 SIGIRR CHID1 CEND1 DEAF1 MIR210HG TMEM80 PTDSS2 B4GALNT4 AP2A2 MUC5B PHRF1 IRF7 PKP3 LMNTD2 TALDO1 RNH1 DRD4 SNORA52 MIR210 MUC6
nsv552776 Chr.11:366710 - 432436 on Build GRCh38 Loss SIGIRR ANO9 PKP3 B4GALNT4
nsv951268 Chr.11:368601 - 503700 on Build GRCh38 Deletion SIGIRR ANO9 PKP3 RNH1 PTDSS2 B4GALNT4
nsv552770 Chr.11:356090 - 444628 on Build GRCh38 Gain SIGIRR ANO9 PKP3 B4GALNT4
dgv1505n54 Chr.11:198510 - 470331 on Build GRCh38 Gain SIGIRR ANO9 IFITM2 IFITM5 PTDSS2 B4GALNT4 PGGHG SIRT3 IFITM1 PSMD13 NLRP6 RIC8A PKP3 MIR6743 ODF3 IFITM3 BET1L
nsv1159790 Chr.11:340219 - 491334 on Build GRCh38 Deletion SIGIRR ANO9 PKP3 PTDSS2 B4GALNT4
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion POLR2L ANO9 LRRC56 TSPAN4 SCT CDHR5 RPLP2 PANO1 PNPLA2 SLC25A22 CRACR2B PIDD1 HRAS EPS8L2 LOC143666 CD151 RASSF7 LOC171391 LOC101059906 PDDC1 SIGIRR CHID1 CEND1 DEAF1 MIR210HG TMEM80 PTDSS2 B4GALNT4 AP2A2 PHRF1 IRF7 PKP3 LMNTD2 TALDO1 RNH1 DRD4 SNORA52 MIR210
nsv552822 Chr.11:403545 - 408352 on Build GRCh38 Loss SIGIRR PKP3

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