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See other SIGIRR CNV Assays ›
Gene Symbol
SIGIRR
Assay Reference Genome
Location

Chr.11:405940 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01256673_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 59307

Gene Name:

 single Ig and TIR domain containing

Gene Aliases:

 IL-1R8, TIR8

Location:

 Chr.11:405716-417454 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SIGIRR NM_001135053.1 10 1446 NP_001128525.1
NM_001135054.1 10 1519 NP_001128526.1
NM_021805.2 10 1415 NP_068577.2
XM_005253044.2 9 1808 XP_005253101.1
XM_005253045.1 9 1704 XP_005253102.1
XM_005253046.1 9 1792 XP_005253103.1
XM_005253048.4 8 1416 XP_005253105.1
XM_017018099.1 10 1726 XP_016873588.1
XM_017018100.1 9 1555 XP_016873589.1
AK025099.1 10 1415 BAB15066.1
AK093427.1 7 1643
AK172830.1 10 1415 BAD18795.1
AY358342.1 8 1581 AAQ88708.1
BC003591.1 9 1345 AAH03591.1
BC025953.1 10 1374 AAH25953.1
BC106007.1 10 1496 AAI06008.1
BX369506.2 5 614
CR457338.1 CAG33619.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss PKP3 IFITM3 CDHR5 HRAS IRF7 LRRC56 LOC101059906 IFITM2 PTDSS2 RASSF7 LMNTD2 IFITM5 B4GALNT4 MIR210 IFITM1 SIGIRR ANO9 MIR210HG PHRF1 LOC143666 RNH1 PGGHG
nsv467633 Chr.11:366710 - 432436 on Build GRCh38 Loss PKP3 B4GALNT4 SIGIRR ANO9
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss PKP3 AP2A2 TSPAN4 SLC25A22 LRRC56 PTDSS2 SCT DEAF1 MUC5AC CD151 PDDC1 EPS8L2 MUC6 ANO9 MIR6744 LOC143666 DRD4 CEND1 TALDO1 CDHR5 CHID1 MUC5B LOC101927503 HRAS POLR2L PNPLA2 IRF7 PANO1 LOC101059906 MUC2 RPLP2 RASSF7 PIDD1 LMNTD2 B4GALNT4 TMEM80 MIR210 SNORA52 SIGIRR LOC171391 MIR210HG CRACR2B PHRF1 TOLLIP RNH1
nsv552770 Chr.11:356090 - 444628 on Build GRCh38 Gain PKP3 B4GALNT4 SIGIRR ANO9
nsv951268 Chr.11:368601 - 503700 on Build GRCh38 Deletion PKP3 B4GALNT4 SIGIRR ANO9 PTDSS2 RNH1
dgv1012n100 Chr.11:198510 - 427836 on Build GRCh38 Gain PKP3 PSMD13 IFITM3 IFITM2 SIRT3 NLRP6 ODF3 MIR6743 IFITM5 BET1L B4GALNT4 IFITM1 SIGIRR ANO9 PGGHG RIC8A
nsv1159790 Chr.11:340219 - 491334 on Build GRCh38 Deletion PKP3 B4GALNT4 SIGIRR ANO9 PTDSS2
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion PKP3 AP2A2 TSPAN4 SLC25A22 LRRC56 PTDSS2 SCT DEAF1 CD151 PDDC1 EPS8L2 ANO9 LOC143666 DRD4 CEND1 TALDO1 CDHR5 CHID1 HRAS POLR2L PNPLA2 IRF7 PANO1 LOC101059906 RPLP2 RASSF7 PIDD1 LMNTD2 B4GALNT4 TMEM80 MIR210 SNORA52 SIGIRR LOC171391 MIR210HG CRACR2B PHRF1 RNH1
nsv552822 Chr.11:403545 - 408352 on Build GRCh38 Loss PKP3 SIGIRR

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