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Gene Symbol
DXO
Assay Reference Genome
Location

Chr.6:31970970 on build GRCh38
Cytoband
6p21.33
Assay ID Hs01261764_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 1797

Gene Name:

 decapping exoribonuclease

Gene Aliases:

 DOM3L, DOM3Z, NG6, RAI1

Location:

 Chr.6:31969811-31972290 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
DXO NM_005510.3 3 867 NP_005501.2
XM_006715005.3 3 946 XP_006715068.1
XM_017010329.1 3 650 XP_016865818.1
AF059252.1 3 663 AAC78603.1
AK310107.1 2 946
BC009344.2 3 707 AAH09344.1
BC019083.2 3 879 AAH19083.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv601970 Chr.6:31970674 - 31980252 on Build GRCh38 Loss DXO STK19
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss HLA-DRB6 MIR6833 HLA-DRB5 SKIV2L FKBPL GPSM3 HCG23 SLC44A4 HLA-DQA1 HLA-DQB1 STK19 ZBTB12 CFB TNXA AGER C2-AS1 MIR6721 C6orf10 CYP21A1P EGFL8 NEU1 SNORD48 BTNL2 CYP21A2 NOTCH4 RNF5 C4A HLA-DQB1-AS1 HLA-DRA LOC100507547 HLA-DRB1 HSPA1A DXO TNXB LOC101929163 C4B PBX2 SNORD52 PPT2-EGFL8 HSPA1B ATF6B MIR1236 C2 EHMT2 C6orf48 NELFE AGPAT1 PRRT1 PPT2
nsv428141 Chr.6:31903735 - 32125066 on Build GRCh38 Gain+Loss C4A SKIV2L C2-AS1 ATF6B MIR1236 C2 CYP21A1P DXO TNXB NELFE STK19 CFB C4B TNXA CYP21A2
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion HLA-DRB6 SNORD84 NFKBIL1 MIR6833 HLA-DRB5 SKIV2L FKBPL LTB GPSM3 HCG23 MICB SLC44A4 C6orf25 HSPA1L LTA HCG26 VWA7 ATP6V1G2-DDX39B ATP6V1G2 C6orf47 STK19 ZBTB12 CFB TNXA TNF AGER AIF1 C2-AS1 APOM DDX39B-AS1 MIR6721 LY6G6E C6orf10 LY6G5C CYP21A1P EGFL8 NEU1 SNORD48 BTNL2 LY6G6F CLIC1 CYP21A2 NOTCH4 LY6G6D RNF5 SAPCD1 C4A HLA-DRA LOC100507547 MIR4646 LOC102725068 MIR6832 HLA-DRB1 SNORD117 HSPA1A LOC100287329 DDAH2 DXO SNORA38 LY6G6C TNXB LOC101929163 CSNK2B BAG6 C4B HCP5 LY6G5B PBX2 MSH5 LST1 SNORD52 PRRC2A PPT2-EGFL8 GPANK1 ABHD16A HSPA1B ATF6B MSH5-SAPCD1 DDX39B MIR1236 LSM2 SAPCD1-AS1 C2 EHMT2 C6orf48 NELFE AGPAT1 MCCD1 PRRT1 VARS PPT2 NCR3
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss SNORD84 NFKBIL1 SKIV2L LTB MICB SLC44A4 C6orf25 HSPA1L LTA HCG26 VWA7 ATP6V1G2-DDX39B ATP6V1G2 MIR6891 C6orf47 STK19 ZBTB12 CFB TNXA TNF HLA-B AIF1 C2-AS1 APOM DDX39B-AS1 LY6G6E LY6G5C CYP21A1P NEU1 SNORD48 LY6G6F CLIC1 CYP21A2 LY6G6D SAPCD1 C4A MICA MIR4646 LOC102725068 MIR6832 SNORD117 HSPA1A LOC100287329 DDAH2 DXO SNORA38 LY6G6C TNXB CSNK2B BAG6 C4B HCP5 LY6G5B MSH5 LST1 SNORD52 PRRC2A GPANK1 ABHD16A HSPA1B MSH5-SAPCD1 DDX39B MIR1236 LSM2 SAPCD1-AS1 C2 EHMT2 C6orf48 NELFE MCCD1 VARS NCR3
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion HLA-DRB6 COL11A2 FKBPL LTB MIR219A1 HCG23 PSMB8-AS1 HLA-DQA1 LTA HCG26 VWA7 ATP6V1G2 CFB TNXA RXRB HLA-DOA AIF1 C2-AS1 APOM PSMB9 MIR6721 TAP1 PPP1R2P1 TAPBP NEU1 BTNL2 RING1 LY6G6F CLIC1 HCG25 CYP21A2 LY6G6D DAXX SAPCD1 HLA-DQB1-AS1 HLA-DRA MIR4646 LOC102725068 HLA-DRB1 RPS18 SNORD117 SNORA38 TNXB CSNK2B SNORD52 PRRC2A GPANK1 ABHD16A ATF6B MSH5-SAPCD1 MIR1236 MIR3135B HSD17B8 LSM2 C6orf48 AGPAT1 WDR46 PFDN6 PRRT1 VARS SNORD84 NFKBIL1 MIR6833 HLA-DRB5 HLA-DMB SKIV2L SYNGAP1 GPSM3 MICB SLC44A4 C6orf25 HSPA1L HLA-DQB2 HLA-DPB2 HLA-DQB1 ATP6V1G2-DDX39B C6orf47 MIR6873 RGL2 B3GALT4 STK19 ZBTB12 MIR5004 TNF AGER MIR6834 VPS52 DDX39B-AS1 LY6G6E C6orf10 LY6G5C CYP21A1P LOC100294145 ZBTB9 EGFL8 SNORD48 HLA-DPA1 BRD2 ZBTB22 NOTCH4 TAP2 RNF5 C4A LOC100507547 MIR6832 HSPA1A CUTA LOC100287329 DDAH2 DXO LY6G6C LOC101929163 BAG6 HCG24 C4B HCP5 LY6G5B PBX2 MSH5 LST1 HLA-DQA2 PPT2-EGFL8 HSPA1B SLC39A7 DDX39B PHF1 HLA-DPB1 SAPCD1-AS1 PSMB8 C2 EHMT2 NELFE HLA-DOB MCCD1 KIFC1 PPT2 HLA-DMA NCR3
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion HLA-DRB6 COL11A2 FKBPL LTB MIR219A1 HCG23 PSMB8-AS1 HLA-DQA1 LTA HCG26 VWA7 ATP6V1G2 CFB TNXA RXRB HLA-DOA AIF1 C2-AS1 APOM PSMB9 MIR6721 TAP1 PPP1R2P1 TAPBP NEU1 BTNL2 RING1 LY6G6F CLIC1 HCG25 CYP21A2 LY6G6D DAXX SAPCD1 HLA-DQB1-AS1 HLA-DRA MIR4646 LOC102725068 HLA-DRB1 RPS18 SNORD117 SNORA38 TNXB CSNK2B SNORD52 PRRC2A GPANK1 ABHD16A ATF6B MSH5-SAPCD1 MIR1236 MIR3135B HSD17B8 LSM2 C6orf48 AGPAT1 WDR46 PFDN6 PRRT1 VARS SNORD84 NFKBIL1 MIR6833 HLA-DRB5 HLA-DMB SKIV2L SYNGAP1 GPSM3 MICB SLC44A4 C6orf25 HSPA1L HLA-DQB2 HLA-DPB2 HLA-DQB1 ATP6V1G2-DDX39B C6orf47 MIR6873 RGL2 B3GALT4 STK19 ZBTB12 MIR5004 TNF AGER MIR6834 VPS52 DDX39B-AS1 LY6G6E C6orf10 LY6G5C CYP21A1P LOC100294145 ZBTB9 EGFL8 SNORD48 HLA-DPA1 BRD2 ZBTB22 NOTCH4 TAP2 RNF5 C4A LOC100507547 MIR6832 HSPA1A CUTA LOC100287329 DDAH2 DXO LY6G6C LOC101929163 BAG6 HCG24 C4B HCP5 LY6G5B PBX2 MSH5 LST1 HLA-DQA2 PPT2-EGFL8 HSPA1B SLC39A7 DDX39B PHF1 HLA-DPB1 SAPCD1-AS1 PSMB8 C2 EHMT2 NELFE HLA-DOB MCCD1 KIFC1 PPT2 HLA-DMA NCR3
nsv830628 Chr.6:31919777 - 31979823 on Build GRCh38 Loss C2 DXO SKIV2L NELFE STK19 C2-AS1 CFB MIR1236
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss SNORD84 NFKBIL1 MIR6833 SKIV2L FKBPL LTB GPSM3 HCG23 MICB SLC44A4 C6orf25 HSPA1L LTA HCG26 VWA7 ATP6V1G2-DDX39B ATP6V1G2 MIR6891 C6orf47 STK19 ZBTB12 CFB TNXA TNF AGER HLA-B AIF1 C2-AS1 APOM DDX39B-AS1 MIR6721 LY6G6E C6orf10 LY6G5C CYP21A1P EGFL8 NEU1 SNORD48 BTNL2 LY6G6F CLIC1 CYP21A2 NOTCH4 LY6G6D RNF5 SAPCD1 C4A HLA-DRA MICA LOC100507547 MIR4646 LOC102725068 MIR6832 SNORD117 HSPA1A LOC100287329 DDAH2 DXO SNORA38 LY6G6C TNXB LOC101929163 CSNK2B BAG6 C4B HCP5 LY6G5B PBX2 MSH5 LST1 SNORD52 PRRC2A PPT2-EGFL8 GPANK1 ABHD16A HSPA1B ATF6B MSH5-SAPCD1 DDX39B MIR1236 LSM2 SAPCD1-AS1 C2 EHMT2 C6orf48 NELFE AGPAT1 MCCD1 PRRT1 VARS PPT2 NCR3
nsv284 Chr.6:31957962 - 32028944 on Build GRCh38 Deletion CYP21A1P DXO C4A SKIV2L NELFE STK19 C4B TNXA

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