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Gene Symbol
DXO
Assay Reference Genome
Location

Chr.6:31970970 on build GRCh38
Cytoband
6p21.33
Assay ID Hs01261764_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 1797

Gene Name:

 decapping exoribonuclease

Gene Aliases:

 DOM3L, DOM3Z, NG6, RAI1

Location:

 Chr.6:31969811-31972290 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
DXO NM_005510.3 3 867 NP_005501.2
XM_006715005.3 3 946 XP_006715068.1
XM_017010329.1 3 650 XP_016865818.1
AF059252.1 3 663 AAC78603.1
AK310107.1 2 946
BC009344.2 3 707 AAH09344.1
BC019083.2 3 879 AAH19083.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv601970 Chr.6:31970674 - 31980252 on Build GRCh38 Loss DXO STK19
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss LOC101929163 HLA-DQA1 GPSM3 AGER EHMT2 HLA-DQB1 LOC100507547 RNF5 CYP21A1P PPT2 NELFE C6orf10 MIR1236 DXO STK19 C2 TNXB C4A HLA-DRA C6orf48 CYP21A2 MIR6721 SLC44A4 CFB HLA-DQB1-AS1 EGFL8 C4B NOTCH4 HSPA1A HLA-DRB5 MIR6833 TNXA ZBTB12 HSPA1B HLA-DRB1 AGPAT1 NEU1 ATF6B SNORD52 PBX2 HLA-DRB6 PRRT1 PPT2-EGFL8 C2-AS1 SNORD48 SKIV2L BTNL2 HCG23 FKBPL
esv2759415 Chr.6:31903735 - 32241336 on Build GRCh38 Gain+Loss CYP21A2 MIR6721 CFB EGFL8 GPSM3 AGER C4B LOC100507547 NOTCH4 RNF5 CYP21A1P MIR6833 PPT2 TNXA AGPAT1 NELFE ATF6B PBX2 MIR1236 PRRT1 DXO STK19 PPT2-EGFL8 C2 C2-AS1 SKIV2L TNXB C4A FKBPL
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion LOC101929163 ATP6V1G2 LOC100287329 C6orf25 MCCD1 NFKBIL1 GPSM3 LY6G6C AGER EHMT2 TNF LOC100507547 RNF5 SNORA38 VARS CYP21A1P PPT2 AIF1 MSH5 MSH5-SAPCD1 C6orf47 NELFE CSNK2B C6orf10 APOM LY6G5B MIR1236 HCG26 LY6G6F SNORD117 DXO BAG6 STK19 C2 LY6G6E TNXB C4A HLA-DRA NCR3 C6orf48 CYP21A2 MIR6721 VWA7 SLC44A4 CFB EGFL8 SAPCD1 C4B NOTCH4 HSPA1A HLA-DRB5 HCP5 SAPCD1-AS1 LSM2 MIR6833 PRRC2A LY6G6D TNXA ZBTB12 DDX39B HSPA1L HSPA1B HLA-DRB1 ATP6V1G2-DDX39B SNORD84 DDAH2 AGPAT1 LST1 NEU1 ATF6B LTA MICB DDX39B-AS1 LOC102725068 SNORD52 PBX2 GPANK1 LTB HLA-DRB6 ABHD16A CLIC1 MIR4646 PRRT1 MIR6832 PPT2-EGFL8 C2-AS1 LY6G5C SNORD48 SKIV2L BTNL2 HCG23 FKBPL
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion LOC101929163 LOC100287329 LY6G6C B3GALT4 AGER TAP1 EHMT2 TNF LOC100507547 PSMB8 VPS52 TAPBP HLA-DOA KIFC1 LOC100294145 PPT2 DAXX RGL2 MIR219A1 MSH5-SAPCD1 HLA-DPB2 CSNK2B ZBTB22 RING1 LY6G5B PSMB9 HCG26 LY6G6F SNORD117 DXO BAG6 TAP2 LY6G6E TNXB HSD17B8 C4A HLA-DRA C6orf48 CYP21A2 HLA-DQB2 SLC44A4 HLA-DQA2 CFB HLA-DQB1-AS1 HLA-DMB MIR6834 HSPA1A LSM2 DDX39B HSPA1L HSPA1B HLA-DRB1 ATP6V1G2-DDX39B LST1 NEU1 MICB SNORD52 PHF1 LTB ABHD16A SLC39A7 MIR6832 PPT2-EGFL8 HLA-DMA HCG24 SNORD48 SKIV2L HLA-DPA1 BTNL2 PPP1R2P1 HCG23 ATP6V1G2 HLA-DQA1 C6orf25 MCCD1 NFKBIL1 RPS18 BRD2 PFDN6 GPSM3 WDR46 HLA-DQB1 PSMB8-AS1 RNF5 SNORA38 VARS CYP21A1P MIR5004 AIF1 MIR6873 MSH5 SYNGAP1 C6orf47 NELFE COL11A2 C6orf10 MIR3135B APOM MIR1236 STK19 C2 HCG25 NCR3 CUTA MIR6721 VWA7 EGFL8 RXRB SAPCD1 C4B NOTCH4 HLA-DRB5 HCP5 SAPCD1-AS1 MIR6833 PRRC2A LY6G6D TNXA ZBTB12 SNORD84 DDAH2 AGPAT1 ATF6B LTA DDX39B-AS1 LOC102725068 PBX2 GPANK1 HLA-DRB6 CLIC1 MIR4646 PRRT1 C2-AS1 LY6G5C HLA-DPB1 ZBTB9 HLA-DOB FKBPL
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss ATP6V1G2 LOC100287329 C6orf25 MCCD1 NFKBIL1 HLA-B LY6G6C EHMT2 TNF SNORA38 VARS CYP21A1P AIF1 MSH5 MSH5-SAPCD1 C6orf47 NELFE CSNK2B APOM LY6G5B MIR1236 HCG26 LY6G6F SNORD117 DXO BAG6 STK19 C2 LY6G6E TNXB C4A NCR3 C6orf48 CYP21A2 VWA7 SLC44A4 CFB SAPCD1 C4B HSPA1A HCP5 SAPCD1-AS1 LSM2 PRRC2A LY6G6D TNXA ZBTB12 DDX39B HSPA1L HSPA1B MICA ATP6V1G2-DDX39B SNORD84 DDAH2 LST1 NEU1 LTA MICB DDX39B-AS1 LOC102725068 SNORD52 GPANK1 LTB MIR6891 ABHD16A CLIC1 MIR4646 MIR6832 C2-AS1 LY6G5C SNORD48 SKIV2L
nsv830628 Chr.6:31919777 - 31979823 on Build GRCh38 Loss DXO NELFE STK19 C2 C2-AS1 SKIV2L CFB MIR1236
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion LOC101929163 LOC100287329 LY6G6C B3GALT4 AGER TAP1 EHMT2 TNF LOC100507547 PSMB8 VPS52 TAPBP HLA-DOA KIFC1 LOC100294145 PPT2 DAXX RGL2 MIR219A1 MSH5-SAPCD1 HLA-DPB2 CSNK2B ZBTB22 RING1 LY6G5B PSMB9 HCG26 LY6G6F SNORD117 DXO BAG6 TAP2 LY6G6E TNXB HSD17B8 C4A HLA-DRA C6orf48 CYP21A2 HLA-DQB2 SLC44A4 HLA-DQA2 CFB HLA-DQB1-AS1 HLA-DMB MIR6834 HSPA1A LSM2 DDX39B HSPA1L HSPA1B HLA-DRB1 ATP6V1G2-DDX39B LST1 NEU1 MICB SNORD52 PHF1 LTB ABHD16A SLC39A7 MIR6832 PPT2-EGFL8 HLA-DMA HCG24 SNORD48 SKIV2L HLA-DPA1 BTNL2 PPP1R2P1 HCG23 ATP6V1G2 HLA-DQA1 C6orf25 MCCD1 NFKBIL1 RPS18 BRD2 PFDN6 GPSM3 WDR46 HLA-DQB1 PSMB8-AS1 RNF5 SNORA38 VARS CYP21A1P MIR5004 AIF1 MIR6873 MSH5 SYNGAP1 C6orf47 NELFE COL11A2 C6orf10 MIR3135B APOM MIR1236 STK19 C2 HCG25 NCR3 CUTA MIR6721 VWA7 EGFL8 RXRB SAPCD1 C4B NOTCH4 HLA-DRB5 HCP5 SAPCD1-AS1 MIR6833 PRRC2A LY6G6D TNXA ZBTB12 SNORD84 DDAH2 AGPAT1 ATF6B LTA DDX39B-AS1 LOC102725068 PBX2 GPANK1 HLA-DRB6 CLIC1 MIR4646 PRRT1 C2-AS1 LY6G5C HLA-DPB1 ZBTB9 HLA-DOB FKBPL
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss LOC101929163 ATP6V1G2 LOC100287329 C6orf25 MCCD1 NFKBIL1 HLA-B GPSM3 LY6G6C AGER EHMT2 TNF LOC100507547 RNF5 SNORA38 VARS CYP21A1P PPT2 AIF1 MSH5 MSH5-SAPCD1 C6orf47 NELFE CSNK2B C6orf10 APOM LY6G5B MIR1236 HCG26 LY6G6F SNORD117 DXO BAG6 STK19 C2 LY6G6E TNXB C4A HLA-DRA NCR3 C6orf48 CYP21A2 MIR6721 VWA7 SLC44A4 CFB EGFL8 SAPCD1 C4B NOTCH4 HSPA1A HCP5 SAPCD1-AS1 LSM2 MIR6833 PRRC2A LY6G6D TNXA ZBTB12 DDX39B HSPA1L HSPA1B MICA ATP6V1G2-DDX39B SNORD84 DDAH2 AGPAT1 LST1 NEU1 ATF6B LTA MICB DDX39B-AS1 LOC102725068 SNORD52 PBX2 GPANK1 LTB MIR6891 ABHD16A CLIC1 MIR4646 PRRT1 MIR6832 PPT2-EGFL8 C2-AS1 LY6G5C SNORD48 SKIV2L BTNL2 HCG23 FKBPL
nsv5247 Chr.6:31957962 - 32055439 on Build GRCh38 Deletion DXO CYP21A2 NELFE STK19 CYP21A1P SKIV2L TNXB TNXA C4B C4A

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