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See other B3GNTL1 CNV Assays ›
Gene Symbol
B3GNTL1
Assay Reference Genome
Location

Chr.17:82942840 on build GRCh38
Cytoband
17q25.3
Assay ID Hs01266378_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 146712

Gene Name:

 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1

Gene Aliases:

 3-Gn-T8, B3GNT8, BGnT-8, beta-1, beta3Gn-T8, beta3GnTL1

Location:

 Chr.17:82942149-83051845 on Build GRCh38

Assay Gene Location:

 Within Exon 20
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
B3GNTL1 NM_001009905.2 13 2334 NP_001009905.1
NM_001320742.1 14 2452 NP_001307671.1
NM_001320743.1 9 2929 NP_001307672.1
NR_135465.1 14 2689
NR_135466.1
AK054757.1
BU623325.1

Target Gene Details

Entrez Gene ID:

 6904

Gene Name:

 tubulin folding cofactor D

Gene Aliases:

 SSD-1, tfcD

Location:

 Chr.17:82752048-82943186 on Build GRCh38

Assay Gene Location:

 Within Exon 56
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TBCD NM_005993.4 39 4086 NP_005984.3
XM_005256399.4 27 2883 XP_005256456.1
XM_005256404.4 27 2925 XP_005256461.1
XM_006722290.2 38 3983 XP_006722353.1
XM_006722291.3 27 3207 XP_006722354.1
XM_006722292.2 25 2619 XP_006722355.1
XM_011523589.1 34 3626 XP_011521891.1
XM_011523590.1 34 3707 XP_011521892.1
XM_011523591.1 34 3611 XP_011521893.1
XM_011523593.1 33 3218 XP_011521895.1
XM_011523594.1 26 2688 XP_011521896.1
XM_011523595.2 26 2766 XP_011521897.1
XM_011523597.2 24 3419 XP_011521899.1
XM_011523598.1 24 2477 XP_011521900.1
XM_011523599.2 24 3195 XP_011521901.1
XM_011523600.2 25 2639 XP_011521902.1
XM_017024989.1 23 2333 XP_016880478.1
XM_017024990.1 27 2705 XP_016880479.1
AA421669.1
AK057975.1 20 1964
BC012824.2 12 1543 AAH12824.2
BG254219.1 1 53

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1067553 Chr.17:82530808 - 83091923 on Build GRCh38 Loss FN3KRP FN3K LOC101929552 LOC105371944 RAB40B FOXK2 B3GNTL1 LOC105376791 WDR45B ZNF750 TBCD METRNL MIR4525
dgv3296n100 Chr.17:82851564 - 83091923 on Build GRCh38 Gain LOC105371944 TBCD METRNL B3GNTL1
nsv428351 Chr.17:81152631 - 83064073 on Build GRCh38 Gain CEP131 RFNG MCRIP1 NPB GCGR OXLD1 RAB40B SECTM1 ARHGDIA MAFG-AS1 CSNK1D PDE6G HEXDC WDR45B SIRT7 MIR6787 SLC25A10 ASPSCR1 MIR4740 C17orf62 BAHCC1 NPLOC4 C17orf89 MRPL12 LOC101929511 TMEM105 ACTG1 CD7 NOTUM FSCN2 SLC16A3 ZNF750 TBCD TEX19 MIR4525 LINC00482 TSPAN10 FN3K P4HB LOC105371944 NARF STRA13 TEPSIN OGFOD3 RAC3 PCYT2 MIR6786 MAFG PPP1R27 CCDC57 AATK-AS1 LOC100130370 MYADML2 FN3KRP LRRC45 DCXR LOC101929552 FAAP100 ALYREF HGS ARL16 FOXK2 B3GNTL1 LOC105376791 SLC38A10 PYCR1 LOC105371925 SNORD134 MIR3186 CCDC137 UTS2R GPS1 ANAPC11 FASN LOC105376790 DUS1L AATK
nsv576217 Chr.17:82937869 - 82960820 on Build GRCh38 Loss LOC105371944 TBCD B3GNTL1
dgv3297n100 Chr.17:82879855 - 83048753 on Build GRCh38 Gain LOC105371944 TBCD B3GNTL1
esv3893052 Chr.17:82895301 - 83102003 on Build GRCh38 Gain LOC105371944 TBCD METRNL B3GNTL1
nsv1057153 Chr.17:82876571 - 83091923 on Build GRCh38 Loss LOC105371944 TBCD METRNL B3GNTL1
esv21913 Chr.17:81828123 - 83103548 on Build GRCh38 Gain+Loss RFNG MCRIP1 NPB RAB40B SECTM1 ARHGDIA MAFG-AS1 CSNK1D HEXDC WDR45B SIRT7 MIR6787 ASPSCR1 C17orf62 LOC101929511 CD7 NOTUM SLC16A3 ZNF750 TBCD TEX19 MIR4525 FN3K P4HB LOC105371944 NARF STRA13 OGFOD3 RAC3 PCYT2 MAFG PPP1R27 CCDC57 METRNL MYADML2 FN3KRP LRRC45 DCXR LOC101929552 ALYREF FOXK2 B3GNTL1 LOC105376791 PYCR1 SNORD134 UTS2R GPS1 ANAPC11 FASN LOC105376790 DUS1L

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