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See other B3GNTL1 CNV Assays ›
Gene Symbol
B3GNTL1
Assay Reference Genome
Location

Chr.17:82942840 on build GRCh38
Cytoband
17q25.3
Assay ID Hs01266378_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 146712

Gene Name:

 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1

Gene Aliases:

 3-Gn-T8, B3GNT8, BGnT-8, beta-1, beta3Gn-T8, beta3GnTL1

Location:

 Chr.17:82942149-83051845 on Build GRCh38

Assay Gene Location:

 Within Exon 20
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
B3GNTL1 NM_001009905.2 13 2334 NP_001009905.1
NM_001320742.1 14 2452 NP_001307671.1
NM_001320743.1 9 2929 NP_001307672.1
NR_135465.1 14 2689
NR_135466.1
AK054757.1
BU623325.1

Target Gene Details

Entrez Gene ID:

 6904

Gene Name:

 tubulin folding cofactor D

Gene Aliases:

 SSD-1, tfcD

Location:

 Chr.17:82752048-82943186 on Build GRCh38

Assay Gene Location:

 Within Exon 56
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TBCD NM_005993.4 39 4086 NP_005984.3
XM_005256399.4 27 2883 XP_005256456.1
XM_005256404.4 27 2925 XP_005256461.1
XM_006722290.2 38 3983 XP_006722353.1
XM_006722291.3 27 3207 XP_006722354.1
XM_006722292.2 25 2619 XP_006722355.1
XM_011523589.1 34 3626 XP_011521891.1
XM_011523590.1 34 3707 XP_011521892.1
XM_011523591.1 34 3611 XP_011521893.1
XM_011523593.1 33 3218 XP_011521895.1
XM_011523594.1 26 2688 XP_011521896.1
XM_011523595.2 26 2766 XP_011521897.1
XM_011523597.2 24 3419 XP_011521899.1
XM_011523598.1 24 2477 XP_011521900.1
XM_011523599.2 24 3195 XP_011521901.1
XM_011523600.2 25 2639 XP_011521902.1
XM_017024989.1 23 2333 XP_016880478.1
XM_017024990.1 27 2705 XP_016880479.1
AA421669.1
AK057975.1 20 1964
BC012824.2 12 1543 AAH12824.2
BG254219.1 1 53

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1067553 Chr.17:82530808 - 83091923 on Build GRCh38 Loss ZNF750 MIR4525 FN3K TBCD RAB40B WDR45B B3GNTL1 FOXK2 FN3KRP METRNL LOC101929552 LOC105376791 LOC105371944
dgv3296n100 Chr.17:82851564 - 83091923 on Build GRCh38 Gain TBCD B3GNTL1 METRNL LOC105371944
nsv428351 Chr.17:81152631 - 83064073 on Build GRCh38 Gain ZNF750 ASPSCR1 C17orf62 LRRC45 NPLOC4 STRA13 SLC16A3 AATK TBCD RAB40B CEP131 LINC00482 B3GNTL1 NPB CCDC57 CSNK1D NOTUM TMEM105 LOC105376790 MIR3186 ANAPC11 OGFOD3 LOC101929511 SIRT7 TSPAN10 MAFG MAFG-AS1 RAC3 CD7 MIR4740 MIR6787 FOXK2 OXLD1 NARF ALYREF HEXDC GCGR ACTG1 ARHGDIA PYCR1 AATK-AS1 P4HB MIR4525 DUS1L HGS UTS2R GPS1 PCYT2 PDE6G FN3KRP ARL16 LOC101929552 MRPL12 LOC105376791 SNORD134 LOC105371944 FSCN2 MIR6786 SLC38A10 DCXR CCDC137 RFNG MCRIP1 FN3K WDR45B C17orf89 SECTM1 LOC105371925 FASN SLC25A10 TEPSIN FAAP100 LOC100130370 MYADML2 PPP1R27 TEX19 BAHCC1
nsv576217 Chr.17:82937869 - 82960820 on Build GRCh38 Loss TBCD B3GNTL1 LOC105371944
dgv3297n100 Chr.17:82879855 - 83048753 on Build GRCh38 Gain TBCD B3GNTL1 LOC105371944
nsv1057153 Chr.17:82876571 - 83091923 on Build GRCh38 Loss TBCD B3GNTL1 METRNL LOC105371944
esv3893052 Chr.17:82895301 - 83102003 on Build GRCh38 Gain TBCD B3GNTL1 METRNL LOC105371944
esv21913 Chr.17:81828123 - 83103548 on Build GRCh38 Gain+Loss ZNF750 ASPSCR1 C17orf62 LRRC45 STRA13 SLC16A3 TBCD RAB40B B3GNTL1 NPB CCDC57 CSNK1D NOTUM LOC105376790 ANAPC11 OGFOD3 LOC101929511 SIRT7 MAFG MAFG-AS1 RAC3 CD7 MIR6787 FOXK2 NARF METRNL ALYREF HEXDC ARHGDIA PYCR1 P4HB MIR4525 DUS1L UTS2R GPS1 PCYT2 FN3KRP LOC101929552 LOC105376791 SNORD134 LOC105371944 DCXR RFNG MCRIP1 FN3K WDR45B SECTM1 FASN MYADML2 PPP1R27 TEX19

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