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See other CTU2 CNV Assays ›
Gene Symbol
CTU2
Assay Reference Genome
Location

Chr.16:88714912 on build GRCh38
Cytoband
16q24.3
Assay ID Hs01271836_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 348180

Gene Name:

 cytosolic thiouridylase subunit 2

Gene Aliases:

 C16orf84, NCS2, UPF0432

Location:

 Chr.16:88706463-88715386 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 13 - Intron 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CTU2 NM_001012759.2 NP_001012777.1
NM_001012762.2 NP_001012780.1
NM_001318507.1 NP_001305436.1
NM_001318513.1 NP_001305442.1
XM_017023210.1 XP_016878699.1
AA448486.1
BC080540.1 AAH80540.1
BC108659.1 AAI08660.1
BC121805.1
BC125269.1
BC157881.1
BM554780.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain ZNF778 GALNS CBFA2T3 APRT PABPN1L LOC339059 CDT1 CTU2 LOC101927793 MIR4722 PIEZO1 ACSF3 LOC107987238 LOC100289580 SLC22A31 LINC00304 LOC100129697 CDH15 LOC400558 TRAPPC2L LOC105371409
nsv471114 Chr.16:88688461 - 88756339 on Build GRCh38 Gain LOC100289580 RNF166 LOC339059 CTU2 MIR4722 PIEZO1
nsv471113 Chr.16:88650665 - 88764428 on Build GRCh38 Loss LOC100289580 SNAI3 RNF166 LOC339059 CTU2 MVD CYBA MIR4722 PIEZO1 SNAI3-AS1
dgv3064n100 Chr.16:88683753 - 88846491 on Build GRCh38 Gain LOC107987238 GALNS LOC100289580 SNAI3 RNF166 APRT LOC339059 CDT1 CTU2 MIR4722 PIEZO1 SNAI3-AS1
nsv517643 Chr.16:88713767 - 88756339 on Build GRCh38 Loss LOC100289580 LOC339059 CTU2 MIR4722 PIEZO1
nsv1065973 Chr.16:88661146 - 88731220 on Build GRCh38 Loss LOC100289580 SNAI3 RNF166 CTU2 MVD MIR4722 PIEZO1 SNAI3-AS1
nsv833327 Chr.16:88667431 - 88757621 on Build GRCh38 Loss LOC100289580 SNAI3 RNF166 LOC339059 CTU2 MIR4722 PIEZO1 SNAI3-AS1
nsv952070 Chr.16:88257295 - 88780192 on Build GRCh38 Deletion ZFPM1 ZC3H18-AS1 MIR5189 LOC339059 CTU2 MVD MIR4722 ZNF469 PIEZO1 IL17C LOC100289580 SNAI3 ZC3H18 RNF166 CYBA SNAI3-AS1 LOC107984862
nsv1927 Chr.16:88712585 - 88743583 on Build GRCh38 Insertion LOC100289580 LOC339059 CTU2 MIR4722 PIEZO1
nsv1160442 Chr.16:88708161 - 88778524 on Build GRCh38 Deletion LOC100289580 LOC339059 CTU2 MIR4722 PIEZO1
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss DEF8 CDK10 PABPN1L LOC339059 CTU2 LOC101927793 SPATA2L MIR4722 URAHP TCF25 LOC105371414 SPG7 RPL13 CPNE7 LOC101927817 CHMP1A TUBB8P7 APRT CDT1 CENPBD1 ACSF3 SPATA33 ZNF276 GAS8-AS1 RNF166 FANCA DPEP1 MC1R CDH15 CYBA LOC107984817 SPIRE2 MVD LOC100289580 SLC22A31 TUBB3 LOC100129697 LOC400558 VPS9D1 SNAI3-AS1 LOC105371409 SNORD68 VPS9D1-AS1 ZNF778 GALNS CBFA2T3 ANKRD11 FAM157C LOC100287036 PIEZO1 IL17C LOC107987238 DBNDD1 SNAI3 AFG3L1P LINC00304 LOC105371419 TRAPPC2L PRDM7 GAS8
dgv3065n100 Chr.16:88711587 - 88927172 on Build GRCh38 Gain GALNS CBFA2T3 APRT PABPN1L LOC339059 CDT1 CTU2 LOC101927793 MIR4722 PIEZO1 LOC107987238 LOC100289580 TRAPPC2L

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