Hs01296716_cn

• Gene Symbol: GCM1
• Assay Reference Genome Location: Chr.6:53130851 on build GRCh38
• Cytoband: 6p12.1

Target Gene Details

• Entrez Gene ID: 8521
• Gene Name: glial cells missing homolog 1
• Gene Aliases: GCMA, hGCMa
• Location: Chr.6:53125644-53262803 on Build GRCh38
• Assay Gene Location: Within Exon 10

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GCM1	NM_003643.3	5	731	NP_003634.2
	XM_017011390.1	9	2113	XP_016866879.1
	AB026493.1	4	602	BAA77250.2
	AB041714.1	4	522	BAA94757.1
	BC096288.1	5	689	AAH96288.1
	D88613.1	5	734	BAA13651.1

More Information

Additional Information:

For this assay, SNP(s) [rs76623467] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, non-DGV Variation

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
anatomical structure morphogenesis
gliogenesis
positive regulation of transcription from RNA polymerase II promoter
calcium ion homeostasis
astrocyte fate commitment
positive regulation of syncytium formation by plasma membrane fusion
branching involved in labyrinthine layer morphogenesis
cell differentiation involved in embryonic placenta development

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II transcription factor activity, sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
DNA binding
transcription factor activity, sequence-specific DNA binding
protein binding
transcription factor binding
zinc ion binding
histone deacetylase binding