accessibility menu, dialog, popup

UserName
Viewing profile as user:

Please enter the information below and press OK to send your cart to Core Services for purchase.

    

System Message

OKCancel
LOADING ...
See other CASKIN1 CNV Assays ›
Gene Symbol
CASKIN1
Assay Reference Genome
Location

Chr.16:2178601 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01307003_cn
Size
Availability Made To Order
Catalog # 4400291
Price
Your Price
Online offer:
Check your price ›

Assay Details

Target Gene Details

Entrez Gene ID:

 57524

Gene Name:

 CASK interacting protein 1

Gene Aliases:

 ANKS5A

Location:

 Chr.16:2177183-2196464 on Build GRCh38

Assay Gene Location:

 Within Exon 20
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CASKIN1 NM_020764.3 20 4277 NP_065815.1
AB037727.1 12 3414 BAA92544.1
AF451977.1 20 4343 AAL49758.1
BC042011.1 AAH42011.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication PRSS29P SYNGR3 ZNF598 WASIR2 NOXO1 CLCN7 FAM173A FAHD1 MIR3178 TSR3 LOC101929280 LOC107984876 RAB40C HAGHL C16orf91 TPSB2 MIR4516 CRAMP1 LOC107987233 NHLRC4 LOC729652 TPSG1 PDPK1 SSTR5 MRPL28 DDX11L10 NDUFB10 NUBP2 PTX4 MIR5587 MIR6767 WFIKKN1 NARFL HN1L STUB1 LOC105371045 PGP CCNF TBL3 ARHGDIG GNG13 SPSB3 NME3 CACNA1H CASKIN1 AMDHD2 RPL3L CAPN15 RAB11FIP3 NTN3 MLST8 CCDC154 NTHL1 SNHG9 SNORD60 TMEM8A TBC1D24 HS3ST6 HAGH RPUSD1 MIR3177 PRSS27 CCDC78 SOX8 RHBDF1 HBM MIR1225 TRAF7 FBXL16 UBE2I RGS11 PDIA2 C1QTNF8 LOC105371047 LOC106660606 NPRL3 ATP6V0C MIR6859-4 ABCA3 E4F1 TELO2 POLR3K PRR35 MIR940 LOC105371038 ERVK13-1 ECI1 SNORA78 LINC00235 METRN WDR24 RPL23AP5 IFT140 HBZ RNPS1 MIR662 HBQ1 LUC7L MIR6511B1 RPS2 TPSAB1 MRPS34 MSLN LOC105371046 DECR2 NPW ABCA17P MCRIP2 MIR6768 AXIN1 BRICD5 GFER TPSD1 FLJ42627 MAPK8IP3 SNHG19 MIR3180-5 KCTD5 SLC9A3R2 HBA2 JMJD8 METTL26 RHOT2 RAB26 NME4 C16orf59 MIR3176 WDR90 HBA1 SNORA64 CHTF18 PKD1 RHBDL1 RNF151 IGFALS FAM234A LMF1 BAIAP3 LOC105371184 MPG PIGQ MSRB1 TSC2 LOC105371049 LINC00254 LOC100287175 UNKL SNRNP25 DNASE1L2 LMF1-AS1 LOC652276 MIR4717 GNPTG PRR25 MEIOB SSTR5-AS1 CEMP1 SNORA10 LOC100134368 TMEM204 MIR3677 EME2
dgv4859n54 Chr.16:1971892 - 2264400 on Build GRCh38 Loss E4F1 SYNGR3 RAB26 ZNF598 ECI1 NOXO1 PKD1 PGP TBL3 MIR4516 RNPS1 CASKIN1 TSC2 MIR6511B1 LOC105371049 MLST8 DNASE1L2 NTHL1 SNORD60 NPW BRICD5 GFER SNHG19 MIR1225 TRAF7 MIR3180-5 SLC9A3R2
dgv4861n54 Chr.16:2083900 - 2246850 on Build GRCh38 Loss E4F1 MLST8 DNASE1L2 RAB26 SNORD60 ECI1 BRICD5 PKD1 PGP SNHG19 MIR1225 TRAF7 MIR3180-5 MIR4516 CASKIN1 TSC2 MIR6511B1 LOC105371049
dgv4863n54 Chr.16:2141733 - 2274302 on Build GRCh38 Loss E4F1 MLST8 DNASE1L2 RAB26 MIR940 SNORD60 ECI1 BRICD5 PGP SNHG19 TRAF7 RNPS1 CASKIN1 LOC106660606 MIR3677
nsv571190 Chr.16:2055054 - 2200730 on Build GRCh38 Loss RAB26 SNHG19 MIR1225 SNORD60 TRAF7 MIR3180-5 MIR4516 CASKIN1 TSC2 MIR6511B1 LOC105371049 PKD1
dgv456n67 Chr.16:2175295 - 2181915 on Build GRCh38 Gain TRAF7 CASKIN1
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain ATP6V0C ABCA3 E4F1 MIR6767 RAB26 C16orf59 MIR940 ECI1 PKD1 MIR3178 PGP CCNF MIR4516 RNPS1 CASKIN1 AMDHD2 TSC2 MIR6511B1 LOC105371049 NTN3 MLST8 DNASE1L2 SNORD60 TBC1D24 LOC652276 LOC729652 ABCA17P MIR6768 BRICD5 MIR4717 PDPK1 SNHG19 MIR1225 TRAF7 MIR3180-5 CEMP1 LOC106660606 MIR3677
nsv457351 Chr.16:2156590 - 2274302 on Build GRCh38 Loss PGP E4F1 MLST8 DNASE1L2 MIR940 TRAF7 ECI1 RNPS1 CASKIN1 LOC106660606 BRICD5 MIR3677
nsv952902 Chr.16:2143400 - 2339999 on Build GRCh38 Deletion ABCA3 E4F1 MLST8 DNASE1L2 RAB26 MIR940 SNORD60 ECI1 BRICD5 MIR4717 PGP SNHG19 TRAF7 RNPS1 CASKIN1 LOC106660606 MIR3677

Back To Top

More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


Back To Top

Related Products