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See other ACAP3 CNV Assays ›
Gene Symbol
ACAP3
Assay Reference Genome
Location

Chr.1:1298070 on build GRCh38
Cytoband
1p36.33
Assay ID Hs01330846_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 116983

Gene Name:

 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3

Gene Aliases:

 CENTB5

Location:

 Chr.1:1292384-1307925 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 13 - Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ACAP3 NM_030649.2 NP_085152.2
XM_005244715.2 XP_005244772.1
XM_005244717.3 XP_005244774.1
XM_011540606.2 XP_011538908.1
XM_011540607.1 XP_011538909.1
XM_011540608.2 XP_011538910.1
XM_011540609.2 XP_011538911.1
XM_017000233.1 XP_016855722.1
AB051503.1 BAB21807.1
AF411981.1 AAL04165.1
AK093954.1 BAC04257.1
BC051194.1 AAH51194.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv817616 Chr.1:1257135 - 1306704 on Build GRCh38 Loss SCNN1D MIR6726 UBE2J2 ACAP3
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss FAM41C GABRD LOC105378948 TAS1R3 MIR6859-2 DDX11L1 LOC100287934 MIB2 MIR1302-2 AURKAIP1 DVL1 LOC105378947 TMEM240 B3GALT6 MIR200B ATAD3C SCNN1D LOC102725121 TNFRSF4 LINC01342 LOC100129534 ATAD3B LOC100133331 LOC100288069 C1orf159 LOC100288175 LOC101928626 MORN1 FNDC10 SAMD11 TNFRSF18 CPTP PLEKHN1 LOC100130417 MMP23B LOC100506504 MIR6808 MIR6726 LOC107985729 CCNL2 LOC105378592 MIR6723 TTLL10 CFAP74 LINC01128 ANKRD65 MMP23A LOC105378591 HES4 OR4F29 PRKCZ SLC35E2 FAM87B TMEM88B MTND1P23 MXRA8 TMEM52 LOC102724312 SDF4 ISG15 FAM138A MIR6727 ACAP3 MRPL20 RNF223 AGRN ATAD3A LOC284600 LOC100134822 LOC107985728 FAAP20 PUSL1 SSU72 GNB1 LOC107984841 UBE2J2 LOC105378949 CALML6 SKI KLHL17 SLC35E2B FAM132A CDK11A MIR429 MTND2P28 OR4F16 NOC2L MIR6859-1 CPSF3L NADK OR4F5 VWA1 LOC729737 LOC105378589 MIR200A PERM1 TTLL10-AS1 CDK11B LOC100132287 WASH7P LINC00115 LOC148413
nsv544965 Chr.1:1217251 - 1306704 on Build GRCh38 Loss B3GALT6 SCNN1D MIR6726 UBE2J2 SDF4 ACAP3 FAM132A
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss MIR6808 MIR6726 TAS1R3 CPSF3L DVL1 CPTP MIR6727 ACAP3 PUSL1
dgv25n54 Chr.1:1290683 - 1306366 on Build GRCh38 Loss SCNN1D MIR6726 ACAP3
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss RNF223 MIR200A MIR6726 TTLL10-AS1 FAM132A B3GALT6 TTLL10 MIR200B MIR429 SCNN1D C1orf159 UBE2J2 SDF4 TNFRSF18 TNFRSF4 ACAP3 LINC01342
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication FAM132A MIR429 C1orf159 LOC105378948 TAS1R3 LOC100288175 CPSF3L SDF4 TNFRSF18 CPTP MIR6727 ACAP3 RNF223 AGRN MIR200A MIR6726 TTLL10-AS1 PUSL1 B3GALT6 TTLL10 MIR200B SCNN1D UBE2J2 TNFRSF4 LINC01342
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion MIR6808 SCNN1D MIR6726 TAS1R3 CPSF3L AURKAIP1 DVL1 CPTP MIR6727 MXRA8 ACAP3 PUSL1
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss HES4 FAM41C SLC35E2 FAM87B TMEM88B MXRA8 LOC105378948 LOC102724312 TAS1R3 SDF4 ISG15 MIR6727 ACAP3 MRPL20 RNF223 LOC100287934 AGRN MIB2 ATAD3A LOC284600 AURKAIP1 LOC107985728 DVL1 PUSL1 TMEM240 B3GALT6 MIR200B ATAD3C SCNN1D SSU72 UBE2J2 TNFRSF4 LINC01342 ATAD3B KLHL17 SLC35E2B FAM132A CDK11A MIR429 LOC100288069 C1orf159 NOC2L LOC100288175 CPSF3L NADK VWA1 FNDC10 SAMD11 TNFRSF18 CPTP PLEKHN1 LOC100130417 MMP23B MIR6808 MIR200A MIR6726 PERM1 LOC107985729 CCNL2 TTLL10-AS1 CDK11B TTLL10 LINC01128 ANKRD65 LINC00115 LOC148413 MMP23A
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion ATAD3B TMEM88B MXRA8 FAM132A MIR429 C1orf159 LOC102724312 TAS1R3 CPSF3L VWA1 FNDC10 SDF4 TNFRSF18 CPTP MIR6727 ACAP3 MMP23B MRPL20 MIR6808 MIR200A MIB2 MIR6726 LOC107985729 ATAD3A CCNL2 AURKAIP1 TTLL10-AS1 CDK11B DVL1 PUSL1 TMEM240 B3GALT6 TTLL10 MIR200B ATAD3C SCNN1D SSU72 ANKRD65 UBE2J2 TNFRSF4 LOC148413 LINC01342
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain MIR6808 SCNN1D MIR6726 TAS1R3 CPSF3L DVL1 CPTP MIR6727 MXRA8 ACAP3 PUSL1
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss MIR6808 MIR6726 AURKAIP1 DVL1 MXRA8 PUSL1 SCNN1D TAS1R3 CPSF3L UBE2J2 CPTP MIR6727 ACAP3
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain KLHL17 HES4 TMEM88B MXRA8 FAM132A MIR429 C1orf159 LOC105378948 NOC2L TAS1R3 LOC100288175 CPSF3L SDF4 SAMD11 TNFRSF18 ISG15 CPTP PLEKHN1 MIR6727 ACAP3 LOC100130417 MRPL20 RNF223 MIR6808 AGRN MIR200A MIR6726 PERM1 LOC284600 CCNL2 AURKAIP1 TTLL10-AS1 LOC107985728 DVL1 PUSL1 B3GALT6 TTLL10 MIR200B SCNN1D ANKRD65 UBE2J2 TNFRSF4 LOC148413 LINC01342
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain MIR200A MIR6726 TTLL10-AS1 PUSL1 FAM132A B3GALT6 TTLL10 MIR200B MIR429 SCNN1D CPSF3L UBE2J2 SDF4 TNFRSF18 TNFRSF4 MIR6727 ACAP3

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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