Hs01336973_cn

• Gene Symbol: ADGRA1
• Assay Reference Genome Location: Chr.10:133080378 on build GRCh38
• Cytoband: 10q26.3

Target Gene Details

• Entrez Gene ID: 84435
• Gene Name: adhesion G protein-coupled receptor A1
• Gene Aliases: GPR123
• Location: Chr.10:133070929-133131675 on Build GRCh38
• Assay Gene Location: Overlaps Exon 4 - Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ADGRA1	XM_005252695.1			XP_005252752.1
	AY181241.1			AAO27353.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv998n100	Chr.10:132998894 - 133170978 on Build GRCh38	Gain	KNDC1 ADGRA1-AS1 ADGRA1
esv2759793	Chr.10:133030918 - 133619181 on Build GRCh38	Gain+Loss	FUOM KNDC1 ECHS1 TUBGCP2 VENTX PAOX MIR202 SCART1 CYP2E1 UTF1 PRAP1 ADAM8 SPRNP1 ZNF511 ADGRA1-AS1 MIR202HG MTG1 ADGRA1 MIR3944 SYCE1 CALY SPRN
dgv1464n54	Chr.10:132900981 - 133134139 on Build GRCh38	Gain	LINC01167 ADGRA1-AS1 LINC01166 ADGRA1 CFAP46 LINC01168
esv3625022	Chr.10:132998655 - 133120915 on Build GRCh38	Gain	ADGRA1-AS1 ADGRA1
nsv1054934	Chr.10:130334322 - 133158679 on Build GRCh38	Gain	PPP2R2D LINC01167 C10orf91 BNIP3 LINC01164 TCERG1L-AS1 LOC107984282 DPYSL4 CFAP46 STK32C NKX6-2 ADGRA1-AS1 LINC01166 MIR378C TCERG1L JAKMIP3 ADGRA1 INPP5A LRRC27 PWWP2B LOC105378568 LINC01168
esv3625015	Chr.10:132889012 - 133114687 on Build GRCh38	Gain	LINC01167 ADGRA1-AS1 LINC01166 ADGRA1 CFAP46 LINC01168
nsv528260	Chr.10:132859348 - 133620799 on Build GRCh38	Loss	LINC01167 KNDC1 ECHS1 TUBGCP2 VENTX MIR202 CFAP46 SCART1 CYP2E1 PRAP1 ADAM8 ZNF511 MIR202HG MTG1 CALY LINC01168 FUOM PAOX UTF1 SPRNP1 ADGRA1-AS1 LINC01166 ADGRA1 MIR3944 SYCE1 SPRN
nsv552526	Chr.10:132699017 - 133103793 on Build GRCh38	Gain	LINC01167 ADGRA1-AS1 LINC01166 ADGRA1 CFAP46 INPP5A LINC01168 NKX6-2
nsv470979	Chr.10:133033478 - 133118280 on Build GRCh38	Loss	ADGRA1-AS1 ADGRA1
nsv952703	Chr.10:133037897 - 133143896 on Build GRCh38	Deletion	ADGRA1-AS1 ADGRA1
nsv552539	Chr.10:133061918 - 133103793 on Build GRCh38	Loss	ADGRA1-AS1 ADGRA1

More Information

Additional Information:

For this assay, SNP(s) [rs111832420] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

G-protein coupled receptor

Gene Ontology Categories:

Process(es)

signal transduction
cell surface receptor signaling pathway
G-protein coupled receptor signaling pathway

Function(s)

G-protein coupled receptor activity