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See other EME2 CNV Assays ›
Gene Symbol
EME2
Assay Reference Genome
Location

Chr.16:1776188 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01342067_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 197342

Gene Name:

 essential meiotic structure-specific endonuclease subunit 2

Gene Aliases:

 SLX2B, gs125

Location:

 Chr.16:1773222-1776714 on Build GRCh38

Assay Gene Location:

 Within Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
EME2 NM_001257370.1 8 1090 NP_001244299.1
XM_017023025.1 8 1012 XP_016878514.1
XM_017023026.1 7 1003 XP_016878515.1
AK074080.2 7 1174 BAB84906.2
EF452422.1 8 1090

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv457335 Chr.16:1729694 - 1789022 on Build GRCh38 Loss MAPK8IP3 SPSB3 NUBP2 MRPS34 MIR3177 NME3 EME2
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication PRR25 MIR662 SSTR5 RPUSD1 AXIN1 RAB40C ARHGDIG HBA2 MIR4717 MRPL28 ATP6V0C NME3 CCDC154 RGS11 SNORD60 CCNF LOC100287175 ABCA17P ECI1 TMEM8A WDR24 WASIR2 HBM STUB1 GNG13 ZNF598 RHOT2 DDX11L10 NPW BRICD5 NARFL GNPTG C1QTNF8 TPSG1 MIR3176 MIR4516 IFT140 MIR5587 LOC105371047 PDIA2 ABCA3 PDPK1 NTN3 PRSS27 SNRNP25 MAPK8IP3 CEMP1 TPSB2 RPS2 SNORA64 SSTR5-AS1 SNHG9 NUBP2 TELO2 BAIAP3 CASKIN1 LOC729652 E4F1 UBE2I MSLN SLC9A3R2 LOC105371049 LOC107987233 CAPN15 TMEM204 FAM173A EME2 TRAF7 RHBDL1 HBZ WFIKKN1 HN1L LOC100134368 LOC101929280 MEIOB MSRB1 HAGHL LOC107984876 UNKL LMF1-AS1 SNORA10 NME4 KCTD5 RHBDF1 MPG RAB26 PTX4 TBL3 MIR3180-5 FAHD1 NTHL1 CACNA1H NOXO1 CCDC78 LOC105371046 LUC7L LOC652276 RAB11FIP3 HBQ1 GFER TSC2 JMJD8 METTL26 WDR90 C16orf91 SNORA78 MIR940 RNPS1 MIR6767 MIR6768 MIR3178 LINC00235 PIGQ IGFALS MIR3177 HS3ST6 HAGH RPL23AP5 MLST8 CHTF18 FLJ42627 MCRIP2 SNHG19 FBXL16 MIR6859-4 MIR1225 RPL3L LMF1 PRR35 LOC105371038 CRAMP1 LOC105371045 ERVK13-1 NPRL3 DNASE1L2 TPSAB1 RNF151 DECR2 SPSB3 SOX8 PGP MIR6511B1 NDUFB10 TPSD1 HBA1 TBC1D24 LINC00254 LOC105371184 FAM234A AMDHD2 PRSS29P TSR3 POLR3K MRPS34 SYNGR3 C16orf59 NHLRC4 LOC106660606 PKD1 MIR3677 CLCN7 METRN
esv3892756 Chr.16:1764390 - 1780436 on Build GRCh38 Loss MAPK8IP3 SPSB3 MRPS34 NME3 EME2
nsv1160328 Chr.16:1704619 - 1797867 on Build GRCh38 Deletion MAPK8IP3 SPSB3 NUBP2 IGFALS MRPS34 MIR3177 NME3 EME2
nsv571171 Chr.16:1757779 - 1804539 on Build GRCh38 Gain+Loss MAPK8IP3 SPSB3 NUBP2 IGFALS MRPS34 NME3 EME2
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss MAPK8IP3 NUBP2 HN1L IGFALS MRPS34 MIR3177 NME3 CRAMP1 HAGH LOC105371046 IFT140 SPSB3 EME2
nsv471069 Chr.16:1754356 - 1791032 on Build GRCh38 Loss MAPK8IP3 SPSB3 NUBP2 IGFALS MRPS34 NME3 EME2
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss MAPK8IP3 FAHD1 NUBP2 HN1L IGFALS MRPS34 MIR3177 NME3 CRAMP1 TELO2 MEIOB HAGH LOC105371046 IFT140 SPSB3 LOC105371047 TMEM204 EME2
nsv827500 Chr.16:1761258 - 1795126 on Build GRCh38 Gain MAPK8IP3 SPSB3 NUBP2 IGFALS MRPS34 NME3 EME2
nsv518641 Chr.16:1645775 - 1835631 on Build GRCh38 Loss MAPK8IP3 FAHD1 NUBP2 HN1L IGFALS MRPS34 MIR3177 NME3 CRAMP1 MEIOB HAGH SPSB3 EME2
nsv571173 Chr.16:1767596 - 1780436 on Build GRCh38 Loss MAPK8IP3 SPSB3 MRPS34 NME3 EME2
nsv952900 Chr.16:1724500 - 1827999 on Build GRCh38 Deletion HAGH MAPK8IP3 SPSB3 FAHD1 NUBP2 IGFALS MRPS34 MIR3177 NME3 EME2
nsv571170 Chr.16:1752231 - 1791032 on Build GRCh38 Loss MAPK8IP3 SPSB3 NUBP2 IGFALS MRPS34 NME3 EME2

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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