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See other EME2 CNV Assays ›
Gene Symbol
EME2
Assay Reference Genome
Location

Chr.16:1776188 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01342067_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 197342

Gene Name:

 essential meiotic structure-specific endonuclease subunit 2

Gene Aliases:

 SLX2B, gs125

Location:

 Chr.16:1773222-1776714 on Build GRCh38

Assay Gene Location:

 Within Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
EME2 NM_001257370.1 8 1090 NP_001244299.1
XM_017023025.1 8 1012 XP_016878514.1
XM_017023026.1 7 1003 XP_016878515.1
AK074080.2 7 1174 BAB84906.2
EF452422.1 8 1090

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571169 Chr.16:1729694 - 1789022 on Build GRCh38 Loss MIR3177 MRPS34 NUBP2 EME2 SPSB3 MAPK8IP3 NME3
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication PRR25 MIR662 HBA2 LOC105371038 FBXL16 RGS11 SYNGR3 LOC105371045 WDR90 ATP6V0C ARHGDIG GNPTG LOC652276 LOC106660606 MIR3176 GNG13 MIR3177 NUBP2 MIR3677 TBC1D24 NPW AMDHD2 FLJ42627 WASIR2 RPL23AP5 SNRNP25 HBA1 C16orf91 NTN3 LOC105371184 POLR3K TPSAB1 RAB26 RAB40C LOC101929280 RPUSD1 LMF1-AS1 TSR3 KCTD5 EME2 NOXO1 ERVK13-1 RHBDF1 CCDC78 SSTR5-AS1 C16orf59 AXIN1 CHTF18 GFER MIR5587 LOC100134368 WDR24 SOX8 SNORA64 MIR6859-4 RNPS1 ABCA3 SNORA78 NARFL PRSS29P MIR3178 UNKL PDIA2 STUB1 METTL26 NDUFB10 LOC729652 RHOT2 TPSB2 PRR35 PGP TBL3 LOC107984876 RPL3L MRPS34 DDX11L10 DECR2 WFIKKN1 MIR6767 TPSD1 PIGQ TRAF7 CASKIN1 MEIOB RNF151 ECI1 CEMP1 LOC107987233 MLST8 TPSG1 CAPN15 LOC105371046 CCDC154 CCNF MIR6768 TELO2 MIR3180-5 BAIAP3 NTHL1 NME3 SNORD60 RHBDL1 PKD1 LINC00235 C1QTNF8 MSRB1 MAPK8IP3 UBE2I PDPK1 JMJD8 MIR940 HAGH FAM173A MIR4516 E4F1 RAB11FIP3 HN1L DNASE1L2 METRN HBZ MRPL28 BRICD5 MCRIP2 PRSS27 LINC00254 RPS2 HBM MPG SSTR5 CACNA1H CLCN7 NHLRC4 HBQ1 LOC105371049 SNHG9 CRAMP1 SNORA10 FAM234A MSLN TMEM204 SLC9A3R2 NPRL3 MIR1225 NME4 MIR4717 LOC105371047 ABCA17P FAHD1 HAGHL HS3ST6 TMEM8A TSC2 LMF1 IFT140 SNHG19 MIR6511B1 SPSB3 PTX4 LOC100287175 ZNF598 LUC7L IGFALS
nsv571172 Chr.16:1764390 - 1817039 on Build GRCh38 Loss MRPS34 NUBP2 EME2 SPSB3 MAPK8IP3 IGFALS NME3 HAGH
nsv1160328 Chr.16:1704619 - 1797867 on Build GRCh38 Deletion MIR3177 MRPS34 NUBP2 EME2 SPSB3 MAPK8IP3 IGFALS NME3
nsv571171 Chr.16:1757779 - 1804539 on Build GRCh38 Gain+Loss MRPS34 NUBP2 EME2 SPSB3 MAPK8IP3 IGFALS NME3
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss CRAMP1 LOC105371046 MRPS34 HN1L NME3 MIR3177 NUBP2 IFT140 EME2 SPSB3 MAPK8IP3 IGFALS HAGH
nsv471069 Chr.16:1754356 - 1791032 on Build GRCh38 Loss MRPS34 NUBP2 EME2 SPSB3 MAPK8IP3 IGFALS NME3
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss CRAMP1 LOC105371046 MRPS34 TMEM204 TELO2 LOC105371047 HN1L FAHD1 NME3 MIR3177 NUBP2 IFT140 EME2 SPSB3 MAPK8IP3 MEIOB IGFALS HAGH
nsv827500 Chr.16:1761258 - 1795126 on Build GRCh38 Gain MRPS34 NUBP2 EME2 SPSB3 MAPK8IP3 IGFALS NME3
nsv571173 Chr.16:1767596 - 1780436 on Build GRCh38 Loss MRPS34 EME2 SPSB3 MAPK8IP3 NME3
nsv518641 Chr.16:1645775 - 1835631 on Build GRCh38 Loss CRAMP1 MRPS34 HN1L FAHD1 NME3 MIR3177 NUBP2 EME2 SPSB3 MAPK8IP3 MEIOB IGFALS HAGH
nsv457336 Chr.16:1752231 - 1791032 on Build GRCh38 Loss MRPS34 NUBP2 EME2 SPSB3 MAPK8IP3 IGFALS NME3
nsv952900 Chr.16:1724500 - 1827999 on Build GRCh38 Deletion MIR3177 MRPS34 NUBP2 EME2 SPSB3 MAPK8IP3 IGFALS FAHD1 NME3 HAGH

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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