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See other PLEKHN1 CNV Assays ›
Gene Symbol
PLEKHN1
Assay Reference Genome
Location

Chr.1:973200 on build GRCh38
Cytoband
1p36.33
Assay ID Hs01343194_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84069

Gene Name:

 pleckstrin homology domain containing N1

Gene Aliases:

 -

Location:

 Chr.1:965820-975108 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 10 - Exon 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PLEKHN1 NM_001160184.1 NP_001153656.1
NM_032129.2 NP_115505.2
XM_006710944.3 XP_006711007.2
XM_011542248.2 XP_011540550.2
XM_017002474.1 XP_016857963.1
XM_017002475.1 XP_016857964.1
XM_017002476.1 XP_016857965.1
XM_017002477.1 XP_016857966.1
XM_017002478.1 XP_016857967.1
AL136730.1 CAB66664.1
BC101386.2 AAI01387.1
BC101387.2 AAI01388.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain PLEKHN1 LOC100130417 LOC284600 HES4 NOC2L LOC105378948 AGRN SAMD11 LOC107985728 PERM1 RNF223 KLHL17 LOC100288175 ISG15 C1orf159
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss MIR6808 DVL1 LOC100130417 MMP23B TAS1R3 MIR200B LOC148413 OR4F16 LOC101928626 CCNL2 B3GALT6 CDK11A KLHL17 MIR1302-2 ACAP3 PLEKHN1 TMEM88B LOC102724312 SSU72 LINC00115 LOC107985729 LOC100133331 TTLL10 SCNN1D CFAP74 ATAD3C LOC107984841 FNDC10 MIR6859-2 MMP23A MIR429 LOC102725121 GNB1 C1orf159 VWA1 LOC105378589 SLC35E2B LOC100129534 NOC2L AGRN SAMD11 LOC105378591 CDK11B LINC01342 PUSL1 LOC105378949 TNFRSF18 CPSF3L MTND2P28 SLC35E2 TNFRSF4 LOC100134822 LOC100287934 TMEM52 DDX11L1 AURKAIP1 MIB2 NADK SKI LOC100288175 LOC729737 MRPL20 FAM41C LOC284600 MIR6727 WASH7P LINC01128 OR4F29 FAM87B LOC105378947 SDF4 MORN1 HES4 LOC107985728 PERM1 LOC105378592 RNF223 FAM132A LOC100132287 TTLL10-AS1 MIR200A OR4F5 PRKCZ CPTP LOC105378948 MIR6726 TMEM240 MIR6859-1 MIR6723 ATAD3A CALML6 FAM138A ISG15 LOC100506504 MTND1P23 LOC100288069 ATAD3B ANKRD65 GABRD MXRA8 FAAP20 UBE2J2
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion PLEKHN1 LOC100130417 LOC284600 HES4 NOC2L LOC105378948 AGRN SAMD11 LOC107985728 PERM1 RNF223 KLHL17 LOC100288175 ISG15 C1orf159
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion PLEKHN1 LOC100130417 LOC284600 NOC2L SAMD11 LOC107985728 KLHL17 PERM1
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain FAM41C LOC100130417 LOC284600 NOC2L LOC105378948 AGRN SAMD11 LINC01342 MIR200B TNFRSF18 KLHL17 ISG15 PLEKHN1 SDF4 HES4 LOC107985728 TNFRSF4 TTLL10 PERM1 RNF223 TTLL10-AS1 MIR200A LOC100288175 MIR429 C1orf159
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss FAM41C MIR6808 DVL1 LOC100130417 LOC284600 MMP23B TAS1R3 MIR6727 MIR200B LOC148413 LINC01128 CCNL2 B3GALT6 CDK11A KLHL17 ACAP3 FAM87B PLEKHN1 TMEM88B LOC102724312 SDF4 HES4 SSU72 LINC00115 LOC107985729 LOC107985728 TTLL10 PERM1 SCNN1D RNF223 FAM132A TTLL10-AS1 MIR200A ATAD3C FNDC10 MMP23A MIR429 C1orf159 VWA1 SLC35E2B CPTP NOC2L LOC105378948 AGRN SAMD11 MIR6726 CDK11B LINC01342 TMEM240 PUSL1 TNFRSF18 ATAD3A ISG15 CPSF3L SLC35E2 TNFRSF4 LOC100288069 ATAD3B ANKRD65 LOC100287934 MXRA8 AURKAIP1 MIB2 NADK UBE2J2 LOC100288175 MRPL20
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain FAM41C LOC100130417 LOC284600 NOC2L LOC105378948 AGRN SAMD11 LINC01128 OR4F16 LOC101928626 MIR6723 KLHL17 ISG15 FAM87B PLEKHN1 MTND1P23 LOC105378947 MTND2P28 HES4 LINC00115 LOC107985728 LOC100133331 LOC100288069 PERM1 LOC100287934 RNF223 LOC107984841 LOC100288175 C1orf159
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss FAM41C LOC100130417 LOC284600 NOC2L LOC105378948 AGRN SAMD11 LINC01342 MIR200B LINC01128 TNFRSF18 B3GALT6 KLHL17 ISG15 FAM87B PLEKHN1 SDF4 HES4 LINC00115 LOC107985728 TNFRSF4 TTLL10 PERM1 RNF223 FAM132A TTLL10-AS1 MIR200A UBE2J2 LOC100288175 MIR429 C1orf159
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain PLEKHN1 HES4 NOC2L LOC105378948 AGRN SAMD11 LINC01342 PERM1 RNF223 KLHL17 LOC100288175 ISG15 C1orf159
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain MIR6808 DVL1 LOC100130417 CPTP LOC284600 NOC2L LOC105378948 AGRN TAS1R3 SAMD11 MIR6726 MIR6727 LINC01342 MIR200B LOC148413 PUSL1 TNFRSF18 CCNL2 B3GALT6 KLHL17 ISG15 ACAP3 PLEKHN1 TMEM88B CPSF3L SDF4 HES4 LOC107985728 TNFRSF4 TTLL10 PERM1 SCNN1D ANKRD65 RNF223 MXRA8 AURKAIP1 FAM132A TTLL10-AS1 MIR200A UBE2J2 LOC100288175 MIR429 MRPL20 C1orf159
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss PLEKHN1 LOC100130417 LOC284600 HES4 NOC2L AGRN SAMD11 LOC107985728 KLHL17 PERM1 ISG15
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion PLEKHN1 SDF4 HES4 NOC2L LOC105378948 AGRN SAMD11 TNFRSF4 LINC01342 MIR200B TTLL10 PERM1 TNFRSF18 RNF223 TTLL10-AS1 MIR200A KLHL17 LOC100288175 MIR429 ISG15 C1orf159
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain FAM41C PLEKHN1 LOC100130417 LOC284600 HES4 NOC2L SAMD11 LOC107985728 KLHL17 PERM1 LINC01128

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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