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See other FCER2 CNV Assays ›
Gene Symbol
FCER2
Assay Reference Genome
Location

Chr.19:7697540 on build GRCh38
Cytoband
19p13.2
Assay ID Hs01362628_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 2208

Gene Name:

 Fc fragment of IgE receptor II

Gene Aliases:

 BLAST-2, CD23, CD23A, CLEC4J, FCE2, IGEBF

Location:

 Chr.19:7688757-7702755 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FCER2 NM_001207019.2 NP_001193948.2
NM_001220500.1 NP_001207429.1
NM_002002.4 NP_001993.2
XM_005272462.4 XP_005272519.1
AK223207.1 BAD96927.1
AK310071.1
AK310707.1
BC014108.2 AAH14108.1
BC062591.1 AAH62591.1
M14766.1 AAA52435.1
M15059.1 AAA52434.1
X04772.1 CAA28465.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv953959 Chr.19:7669315 - 7700414 on Build GRCh38 Deletion FCER2 RETN TRAPPC5 MCEMP1
nsv833731 Chr.19:7589114 - 7739331 on Build GRCh38 Loss CAMSAP3 FCER2 MIR6792 RETN XAB2 TRAPPC5 PCP2 MCEMP1 CLEC4G PET100 STXBP2
nsv1060887 Chr.19:7089546 - 7861087 on Build GRCh38 Gain INSR EVI5L MIR6792 MCOLN1 ARHGEF18 MCEMP1 CLEC4GP1 PET100 STXBP2 ZNF358 CLEC4M CAMSAP3 FCER2 LOC100128573 RETN PEX11G XAB2 PNPLA6 TRAPPC5 PCP2 CD209 CLEC4G C19orf45 LOC107985283
nsv833732 Chr.19:7672656 - 7871329 on Build GRCh38 Gain EVI5L FCER2 TRAPPC5 MCEMP1 CD209 CLEC4G PRR36 CLEC4GP1 CLEC4M
esv2751809 Chr.19:6896369 - 7816144 on Build GRCh38 Gain INSR MCOLN1 ZNF557 MCEMP1 MBD3L4 CLEC4GP1 CLEC4M MBD3L3 LOC729458 RETN ADGRE4P TRAPPC5 LOC107985283 MIR6792 MBD3L2 ARHGEF18 PET100 STXBP2 ZNF358 MBD3L5 CAMSAP3 FLJ25758 FCER2 LOC100128573 PEX11G XAB2 ADGRE1 PNPLA6 PCP2 CD209 CLEC4G C19orf45
nsv1061452 Chr.19:7657750 - 7785131 on Build GRCh38 Gain FCER2 RETN TRAPPC5 MCEMP1 CD209 CLEC4G CLEC4M
esv26340 Chr.19:7690078 - 7698176 on Build GRCh38 Gain FCER2

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More Information


Additional Information:

For this assay, SNP(s) [rs113716290,rs72558007] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Function(s) Process(es)


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