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See other FCER2 CNV Assays ›
Gene Symbol
FCER2
Assay Reference Genome
Location

Chr.19:7697540 on build GRCh38
Cytoband
19p13.2
Assay ID Hs01362628_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 2208

Gene Name:

 Fc fragment of IgE receptor II

Gene Aliases:

 BLAST-2, CD23, CD23A, CLEC4J, FCE2, IGEBF

Location:

 Chr.19:7688757-7702755 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FCER2 NM_001207019.2 NP_001193948.2
NM_001220500.1 NP_001207429.1
NM_002002.4 NP_001993.2
XM_005272462.4 XP_005272519.1
AK223207.1 BAD96927.1
AK310071.1
AK310707.1
BC014108.2 AAH14108.1
BC062591.1 AAH62591.1
M14766.1 AAA52435.1
M15059.1 AAA52434.1
X04772.1 CAA28465.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv953959 Chr.19:7669315 - 7700414 on Build GRCh38 Deletion MCEMP1 FCER2 TRAPPC5 RETN
nsv833731 Chr.19:7589114 - 7739331 on Build GRCh38 Loss MCEMP1 CAMSAP3 XAB2 PCP2 FCER2 MIR6792 PET100 TRAPPC5 STXBP2 CLEC4G RETN
nsv1060887 Chr.19:7089546 - 7861087 on Build GRCh38 Gain EVI5L MIR6792 PET100 CLEC4GP1 LOC107985283 RETN LOC100128573 INSR CD209 PEX11G MCOLN1 MCEMP1 CAMSAP3 XAB2 PCP2 FCER2 CLEC4M PNPLA6 ZNF358 TRAPPC5 STXBP2 CLEC4G ARHGEF18 C19orf45
nsv833732 Chr.19:7672656 - 7871329 on Build GRCh38 Gain MCEMP1 FCER2 CLEC4M EVI5L TRAPPC5 CLEC4GP1 CLEC4G CD209 PRR36
esv2751809 Chr.19:6896369 - 7816144 on Build GRCh38 Gain MBD3L4 CLEC4GP1 LOC107985283 MBD3L3 CD209 PEX11G MCOLN1 MCEMP1 CLEC4M PNPLA6 ZNF358 ADGRE1 TRAPPC5 STXBP2 CLEC4G C19orf45 ADGRE4P MBD3L2 MIR6792 PET100 RETN LOC100128573 INSR LOC729458 CAMSAP3 XAB2 PCP2 FCER2 MBD3L5 ARHGEF18 ZNF557 FLJ25758
esv26340 Chr.19:7690078 - 7698176 on Build GRCh38 Gain FCER2
nsv1061452 Chr.19:7657750 - 7785131 on Build GRCh38 Gain MCEMP1 FCER2 CLEC4M TRAPPC5 CLEC4G RETN CD209

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More Information


Additional Information:

For this assay, SNP(s) [rs113716290,rs72558007] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Function(s) Process(es)


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