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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88885203 on build GRCh38
Cytoband
16q24.3
Assay ID Hs01367335_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 7 1249 NP_005178.4
NM_175931.2 6 915 NP_787127.1
XM_005256323.4 6 1227 XP_005256380.1
XM_011523419.2 7 1351 XP_011521721.1
XM_017023811.1 7 1351 XP_016879300.1
AB010419.1 7 1118 BAA29061.1
AB010420.1 6 915 BAA29062.1
AF052220.1 AAC64698.1
AK308355.1 7 848
AK314766.1 7 1104
BC047019.1 7 1099
BC062624.1 AAH62624.1

Target Gene Details

Entrez Gene ID:

 101927793

Gene Name:

 uncharacterized LOC101927793

Gene Aliases:

 -

Location:

 Chr.16:88883515-88887136 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC101927793 NR_135194.1
AK055866.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss TRAPPC2L PIEZO1 PABPN1L LOC105371409 APRT CDT1 LOC100129697 LOC101927793 CBFA2T3 GALNS LOC107987238
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain ACSF3 PIEZO1 PABPN1L CTU2 LOC400558 MIR4722 APRT CDT1 CDH15 ZNF778 LOC101927793 LOC100289580 LOC107987238 TRAPPC2L LOC339059 LOC105371409 LOC100129697 LINC00304 SLC22A31 CBFA2T3 GALNS
nsv1928 Chr.16:88865211 - 88897277 on Build GRCh38 Insertion PABPN1L LOC101927793 CBFA2T3
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss ACSF3 PABPN1L LOC400558 APRT CDT1 CDH15 LOC101927793 LOC107987238 TRAPPC2L LOC105371409 LOC100129697 LINC00304 SLC22A31 CBFA2T3 GALNS
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain ACSF3 PIEZO1 PABPN1L LOC400558 APRT CDT1 CDH15 ZNF778 LOC101927793 LOC100289580 LOC107987238 TRAPPC2L LOC339059 LOC100287036 LOC105371409 ANKRD11 LOC100129697 LOC105371414 LINC00304 SLC22A31 CBFA2T3 GALNS
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain TRAPPC2L PIEZO1 PABPN1L APRT CDT1 LOC101927793 CBFA2T3 GALNS LOC107987238
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion TRAPPC2L PABPN1L LOC105371409 APRT CDT1 LOC100129697 LOC101927793 CBFA2T3 GALNS LOC107987238
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss ACSF3 PABPN1L LOC400558 APRT CDT1 CDH15 LOC101927793 LOC107987238 TRAPPC2L LOC105371409 LOC100129697 LINC00304 CBFA2T3 GALNS
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss PIEZO1 PABPN1L MIR4722 SPATA2L CDH15 SPIRE2 TRAPPC2L SNAI3-AS1 SPATA33 LOC105371409 GAS8-AS1 URAHP LOC107984817 TCF25 GALNS VPS9D1-AS1 LOC400558 PRDM7 RNF166 LOC101927817 GAS8 ZNF778 AFG3L1P TUBB8P7 LOC100287036 VPS9D1 LOC105371414 MVD IL17C ACSF3 APRT CHMP1A ZNF276 DEF8 LOC100289580 LOC107987238 TUBB3 FAM157C ANKRD11 DPEP1 LINC00304 SLC22A31 DBNDD1 SNORD68 SPG7 CTU2 CDT1 RPL13 SNAI3 LOC101927793 MC1R CDK10 LOC339059 CYBA CENPBD1 FANCA LOC100129697 CPNE7 LOC105371419 CBFA2T3
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain PIEZO1 PABPN1L CTU2 MIR4722 APRT CDT1 LOC101927793 LOC100289580 LOC107987238 TRAPPC2L LOC339059 LOC105371409 LOC100129697 CBFA2T3 GALNS

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