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Gene Symbol
FAAP20
Assay Reference Genome
Location

Chr.1:2194010 on build GRCh38
Cytoband
1p36.33
Assay ID Hs01385164_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 199990

Gene Name:

 Fanconi anemia core complex associated protein 20

Gene Aliases:

 C1orf86, FP7162

Location:

 Chr.1:2184460-2212720 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 11 - Exon 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FAAP20 NM_001146310.1 NP_001139782.1
NM_001256945.1 NP_001243874.1
NM_001256946.1 NP_001243875.1
NM_001256947.1 NP_001243876.1
NM_001282670.1 NP_001269599.1
NM_001282671.1 NP_001269600.1
NM_001282672.1 NP_001269601.1
NM_001282673.1 NP_001269602.1
NM_182533.2 NP_872339.2
NR_046427.1
XM_006710419.3 XP_006710482.1
XM_006710421.3 XP_006710484.1
XM_011540914.2 XP_011539216.1
XM_011540921.2 XP_011539223.1
XM_011540922.1 XP_011539224.1
XM_017000553.1 XP_016856042.1
XM_017000554.1 XP_016856043.1
XM_017000557.1 XP_016856046.1
AF461903.1 AAQ04817.1
AF469129.1 AAP97719.1
AK055593.1 BAB70965.1
AK126870.1 BAC86730.1
AK127994.1 BAC87220.1
AL545931.3
BC066360.1 AAH66360.1
BC103992.2 AAI03993.1
BG825658.1
BU192678.1
BU542153.1
BU626113.1
CN397640.1
DA596011.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv461727 Chr.1:2151050 - 2251031 on Build GRCh38 Loss FAAP20 LOC105378592 LOC100506504 PRKCZ SKI
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss SCNN1D ATAD3B LOC100134822 MIR429 LOC105378589 KLHL17 PERM1 MXRA8 VWA1 WASH7P LOC100129534 FNDC10 MIR6859-2 LOC148413 CALML6 FAM138A FAM132A MIR6808 MORN1 B3GALT6 MIR200A ISG15 LOC107985728 LOC102724312 LOC105378949 LOC100130417 TMEM52 ACAP3 NOC2L CDK11A TAS1R3 ANKRD65 HES4 FAM87B SAMD11 AGRN TNFRSF18 SSU72 TNFRSF4 LINC00115 OR4F5 C1orf159 PRKCZ LOC284600 LOC101928626 LOC100287934 LOC100133331 LOC105378947 LOC107985729 UBE2J2 AURKAIP1 MIR6727 LOC105378592 GABRD MTND2P28 TMEM88B LINC01342 LOC105378948 CPSF3L CFAP74 OR4F16 TTLL10-AS1 MIR200B ATAD3A CPTP SLC35E2 LOC102725121 LOC107984841 LOC100288175 TTLL10 MRPL20 PLEKHN1 RNF223 MIR6723 LOC100132287 ATAD3C SDF4 GNB1 MIR6726 DVL1 TMEM240 OR4F29 MTND1P23 SKI MMP23A PUSL1 MIB2 MIR6859-1 CCNL2 LOC105378591 FAAP20 LINC01128 NADK LOC100506504 MMP23B LOC100288069 MIR1302-2 SLC35E2B LOC729737 CDK11B FAM41C DDX11L1
nsv951530 Chr.1:2153662 - 2229961 on Build GRCh38 Deletion FAAP20 LOC105378592 LOC100506504 PRKCZ SKI
nsv470682 Chr.1:2188394 - 2378754 on Build GRCh38 Loss LOC100129534 FAAP20 LOC105378592 MORN1 SKI
nsv834557 Chr.1:2117631 - 2311104 on Build GRCh38 Loss FAAP20 LOC105378592 LOC100506504 PRKCZ SKI

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