Hs01389267_cn

• Gene Symbol: PCYOX1L
• Assay Reference Genome Location: Chr.5:149369550 on build GRCh38
• Cytoband: 5q32

Target Gene Details

• Entrez Gene ID: 78991
• Gene Name: prenylcysteine oxidase 1 like
• Gene Aliases: -
• Location: Chr.5:149358007-149375112 on Build GRCh38
• Assay Gene Location: Within Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCYOX1L	NM_001301054.1	6	2459	NP_001287983.1
	NM_001301057.1	6	2282	NP_001287986.1
	NM_024028.3	6	2443	NP_076933.3
	XM_011537680.1	7	2463	XP_011535982.1
	XM_011537681.1	5	2253	XP_011535983.1
	XM_011537682.2	3	1789	XP_011535984.1
	AF451985.1	6	2404	AAP97684.1
	AK075414.1	6	2404	BAC11604.1
	AK090410.1	3	4784	BAC03391.1
	AK127281.1	4	4069
	AL834220.1	5	2702	CAD38901.2
	BC000014.2	6	2218	AAH00014.1
	BC004166.2	3	1865	AAH04166.3
	BP397957.1	1	397
	DB573610.1	1	341

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv599948	Chr.5:149346599 - 149413198 on Build GRCh38	Loss	PCYOX1L GRPEL2-AS1 GRPEL2 CARMN IL17B

More Information

Additional Information:

For this assay, SNP(s) [rs77600325] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

lyase

Gene Ontology Categories:

Process(es)

prenylated protein catabolic process
prenylcysteine catabolic process
oxidation-reduction process

Function(s)

prenylcysteine oxidase activity