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See other EME2 CNV Assays ›
Gene Symbol
EME2
Assay Reference Genome
Location

Chr.16:1775922 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01406366_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 197342

Gene Name:

 essential meiotic structure-specific endonuclease subunit 2

Gene Aliases:

 SLX2B, gs125

Location:

 Chr.16:1773222-1776714 on Build GRCh38

Assay Gene Location:

 Within Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
EME2 NM_001257370.1 7 905 NP_001244299.1
XM_017023025.1 7 827 XP_016878514.1
XM_017023026.1 6 818 XP_016878515.1
AK074080.2 6 989 BAB84906.2
EF452422.1 7 905

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv457335 Chr.16:1729694 - 1789022 on Build GRCh38 Loss MRPS34 NME3 MAPK8IP3 EME2 NUBP2 MIR3177 SPSB3
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication CLCN7 METRN TPSG1 C1QTNF8 GNG13 BRICD5 SPSB3 NHLRC4 RNPS1 DNASE1L2 MCRIP2 RNF151 MIR6768 LOC105371049 AXIN1 GNPTG LINC00254 MIR1225 MIR5587 MIR3178 TMEM8A UNKL FLJ42627 ECI1 NUBP2 METTL26 SNHG9 TSR3 NOXO1 SNORD60 LMF1-AS1 NTN3 RGS11 DECR2 C16orf91 MPG SNORA10 SOX8 SSTR5 MIR4516 LINC00235 FBXL16 SLC9A3R2 DDX11L10 STUB1 CCDC78 LOC105371038 PDIA2 FAM234A SNORA64 MSRB1 WFIKKN1 RPL3L MIR6767 TSC2 MSLN LOC106660606 PRSS29P JMJD8 NPW HAGHL WDR90 SNORA78 TPSB2 PRSS27 ATP6V0C MRPL28 NARFL TMEM204 NTHL1 LOC101929280 AMDHD2 TELO2 LOC100134368 TRAF7 ABCA3 MAPK8IP3 KCTD5 PTX4 LOC105371045 MRPS34 LOC729652 MIR4717 NPRL3 MIR662 CHTF18 HS3ST6 POLR3K ARHGDIG TPSD1 CEMP1 HBA1 HBM RPS2 TPSAB1 IFT140 MLST8 CCNF C16orf59 PIGQ MIR940 LOC105371047 CAPN15 SNRNP25 TBC1D24 NME3 RPUSD1 RHOT2 RHBDL1 LOC107984876 LOC652276 MIR3176 HBZ MEIOB PKD1 MIR3180-5 IGFALS LOC105371184 MIR3177 E4F1 CRAMP1 FAM173A HAGH BAIAP3 WASIR2 MIR6511B1 ERVK13-1 CACNA1H SNHG19 PRR25 TBL3 ABCA17P HN1L ZNF598 EME2 NME4 RAB11FIP3 MIR6859-4 SSTR5-AS1 RPL23AP5 LOC105371046 LOC107987233 RHBDF1 HBQ1 UBE2I RAB40C MIR3677 SYNGR3 PDPK1 CCDC154 RAB26 LOC100287175 NDUFB10 PGP PRR35 LUC7L CASKIN1 GFER FAHD1 LMF1 HBA2 WDR24
esv3892756 Chr.16:1764390 - 1780436 on Build GRCh38 Loss MRPS34 NME3 MAPK8IP3 EME2 SPSB3
nsv1160328 Chr.16:1704619 - 1797867 on Build GRCh38 Deletion MRPS34 NME3 MAPK8IP3 EME2 IGFALS NUBP2 MIR3177 SPSB3
nsv571171 Chr.16:1757779 - 1804539 on Build GRCh38 Gain+Loss MRPS34 NME3 MAPK8IP3 EME2 IGFALS NUBP2 SPSB3
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss LOC105371046 MRPS34 NME3 NUBP2 SPSB3 HN1L MAPK8IP3 EME2 IFT140 IGFALS MIR3177 CRAMP1 HAGH
nsv471069 Chr.16:1754356 - 1791032 on Build GRCh38 Loss MRPS34 NME3 MAPK8IP3 EME2 IGFALS NUBP2 SPSB3
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss LOC105371046 MRPS34 LOC105371047 TMEM204 NME3 NUBP2 TELO2 SPSB3 MEIOB HN1L MAPK8IP3 FAHD1 EME2 IFT140 IGFALS MIR3177 CRAMP1 HAGH
nsv827500 Chr.16:1761258 - 1795126 on Build GRCh38 Gain MRPS34 NME3 MAPK8IP3 EME2 IGFALS NUBP2 SPSB3
nsv518641 Chr.16:1645775 - 1835631 on Build GRCh38 Loss MRPS34 NME3 NUBP2 SPSB3 MEIOB HN1L MAPK8IP3 FAHD1 EME2 IGFALS MIR3177 CRAMP1 HAGH
nsv571173 Chr.16:1767596 - 1780436 on Build GRCh38 Loss MRPS34 NME3 MAPK8IP3 EME2 SPSB3
nsv952900 Chr.16:1724500 - 1827999 on Build GRCh38 Deletion MRPS34 NME3 MAPK8IP3 FAHD1 EME2 IGFALS NUBP2 MIR3177 HAGH SPSB3
nsv571170 Chr.16:1752231 - 1791032 on Build GRCh38 Loss MRPS34 NME3 MAPK8IP3 EME2 IGFALS NUBP2 SPSB3

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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