accessibility menu, dialog, popup

UserName
Viewing profile as user:

Please enter the information below and press OK to send your cart to Core Services for purchase.

    

System Message

OKCancel
LOADING ...
See other PDPK1 CNV Assays ›
Gene Symbol
PDPK1
Assay Reference Genome
Location

Chr.16:2586844 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01413707_cn
Size
Availability Made To Order
Catalog # 4400291
Price
Your Price
Online offer:
Check your price ›

Assay Details

Target Gene Details

Entrez Gene ID:

 5170

Gene Name:

 3-phosphoinositide dependent protein kinase 1

Gene Aliases:

 PDK1, PDPK2, PDPK2P, PRO0461

Location:

 Chr.16:2537964-2603190 on Build GRCh38

Assay Gene Location:

 Within Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PDPK1 NM_001261816.1 11 1443 NP_001248745.1
NM_002613.4 11 1443 NP_002604.1
NM_031268.5 8 1062 NP_112558.2
XM_011522521.2 11 5131 XP_011520823.1
XM_011522523.2 8 4755 XP_011520825.1
XM_017023271.1 11 5136 XP_016878760.1
XM_017023272.1 11 1692 XP_016878761.1
XM_017023273.1 11 1401 XP_016878762.1
XM_017023274.1 12 1539 XP_016878763.1
XM_017023275.1 8 4761 XP_016878764.1
XM_017023276.1 8 1005 XP_016878765.1
XM_017023277.1 9 1103 XP_016878766.1
AB209835.1 11 1410 BAD93072.1
AF017995.1 11 1374 AAC51825.1
AK131060.1 11 1377
AK222581.1 11 1386 BAD96301.1
BC006339.2 8 1023 AAH06339.2
BC012103.1 11 1403 AAH12103.1
BC033494.1 8 975 AAH33494.1
CR536517.1 11 1294 CAG38755.1
Y15056.1 11 1373 CAA75341.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv977895 Chr.16:2582644 - 2586873 on Build GRCh38 Duplication PDPK1
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication NPW LOC106660606 MRPL28 RPS2 RPL23AP5 MIR4516 METTL26 E4F1 LOC105371038 HBA1 SSTR5 KCTD5 FAM173A HAGHL AXIN1 ERVK13-1 LMF1-AS1 HS3ST6 MRPS34 NPRL3 SLC9A3R2 MIR662 LINC00235 MCRIP2 LOC107987233 LOC105371046 UBE2I SNORD60 RHOT2 RNF151 LOC105371184 TPSD1 TPSB2 CCDC154 ABCA17P LOC652276 ECI1 GNPTG LOC100287175 SNORA78 IGFALS MSLN STUB1 PDPK1 LMF1 GNG13 METRN MIR4717 RPUSD1 JMJD8 MIR3178 HBM TRAF7 DECR2 DNASE1L2 MLST8 MIR6859-4 TSR3 MIR6768 NARFL NUBP2 CACNA1H WDR24 TMEM204 NOXO1 RHBDF1 PKD1 CAPN15 UNKL LOC107984876 ATP6V0C C1QTNF8 PRR35 WDR90 RPL3L CHTF18 FBXL16 LOC100134368 TPSAB1 MEIOB SOX8 POLR3K HN1L NHLRC4 NTHL1 LOC729652 SPSB3 ARHGDIG TELO2 PGP RAB11FIP3 RAB26 NDUFB10 CLCN7 FAM234A TSC2 PIGQ CEMP1 MIR3677 CCDC78 LOC105371045 LOC101929280 PTX4 RHBDL1 NME4 RNPS1 EME2 HBA2 C16orf59 MIR3180-5 MIR6767 SSTR5-AS1 WASIR2 MIR940 TPSG1 FAHD1 BAIAP3 CRAMP1 SNRNP25 MIR3177 GFER SNHG19 SNORA10 TBC1D24 RAB40C BRICD5 CASKIN1 NTN3 TMEM8A PDIA2 HBQ1 NME3 MIR5587 MPG ABCA3 AMDHD2 SNORA64 FLJ42627 LUC7L HAGH RGS11 LOC105371049 PRSS29P HBZ MSRB1 DDX11L10 TBL3 SNHG9 MIR3176 ZNF598 MIR6511B1 LOC105371047 PRR25 LINC00254 SYNGR3 IFT140 CCNF PRSS27 C16orf91 MIR1225 WFIKKN1 MAPK8IP3
esv2760067 Chr.16:2486824 - 2820535 on Build GRCh38 Gain+Loss PRSS41 TBC1D24 CEMP1 MIR3178 TCEB2 KCTD5 ATP6V0C ERVK13-1 SRRM2 LOC652276 SRRM2-AS1 AMDHD2 PRSS27 PDPK1 FLJ42627 PRSS21 PRSS33
esv3637634 Chr.16:2586284 - 2610862 on Build GRCh38 Gain LOC652276 PDPK1
nsv833122 Chr.16:2501717 - 2663937 on Build GRCh38 Loss ATP6V0C ERVK13-1 TBC1D24 LOC652276 CEMP1 MIR3178 AMDHD2 PDPK1 FLJ42627
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain MIR4717 SNHG19 TBC1D24 MIR3178 LOC106660606 BRICD5 LOC729652 TRAF7 DNASE1L2 MIR4516 E4F1 CASKIN1 NTN3 MLST8 PGP RAB26 MIR6768 ABCA3 AMDHD2 TSC2 CEMP1 LOC105371049 MIR3677 PKD1 SNORD60 MIR6511B1 ATP6V0C RNPS1 C16orf59 MIR3180-5 MIR6767 ABCA17P LOC652276 ECI1 MIR940 CCNF MIR1225 PDPK1
nsv833123 Chr.16:2561247 - 2764988 on Build GRCh38 Gain+Loss ERVK13-1 SRRM2 LOC652276 SRRM2-AS1 PRSS27 PDPK1 FLJ42627 KCTD5

Back To Top

More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


Back To Top

Related Products