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See other CASKIN1 CNV Assays ›
Gene Symbol
CASKIN1
Assay Reference Genome
Location

Chr.16:2185327 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01431509_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 57524

Gene Name:

 CASK interacting protein 1

Gene Aliases:

 ANKS5A

Location:

 Chr.16:2177183-2196464 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 11 - Exon 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CASKIN1 NM_020764.3 NP_065815.1
AB037727.1 BAA92544.1
AF451977.1 AAL49758.1
BC042011.1 AAH42011.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication MIR6768 IFT140 MSRB1 METRN MIR1225 RHBDF1 AXIN1 C1QTNF8 LOC100287175 TMEM8A SNRNP25 RPL3L MIR6511B1 HAGHL NPW NPRL3 NHLRC4 MCRIP2 MIR5587 MIR3177 LOC107984876 TBL3 HBA2 MIR6859-4 CLCN7 HAGH CASKIN1 LOC106660606 LMF1 LOC107987233 WDR90 WASIR2 PIGQ TPSG1 LINC00254 GNG13 RGS11 DDX11L10 CCDC154 LOC105371038 SNORA64 TMEM204 MSLN HBA1 SSTR5 PRSS29P FAM173A CCNF NDUFB10 CACNA1H PDIA2 LOC105371046 WFIKKN1 PDPK1 MIR6767 RNPS1 LMF1-AS1 TELO2 NUBP2 PGP FAHD1 HN1L LINC00235 TPSB2 ECI1 SNHG19 NME4 TPSD1 LOC100134368 LOC652276 RAB11FIP3 BRICD5 TSR3 RHOT2 MIR4717 MIR3178 MIR940 ZNF598 FLJ42627 NME3 LOC729652 MEIOB CRAMP1 NOXO1 DECR2 STUB1 IGFALS CEMP1 MRPL28 FBXL16 TRAF7 MIR4516 SLC9A3R2 SNORA78 DNASE1L2 MRPS34 LOC101929280 CAPN15 RPUSD1 ARHGDIG MPG C16orf59 MIR3677 BAIAP3 JMJD8 TSC2 RHBDL1 SNORD60 HBM RAB26 RPS2 POLR3K WDR24 SOX8 ERVK13-1 CCDC78 MIR3176 PRR25 ATP6V0C SNORA10 TBC1D24 NTHL1 GFER NARFL LUC7L TPSAB1 UNKL LOC105371045 SSTR5-AS1 MLST8 LOC105371184 UBE2I RAB40C FAM234A RNF151 HS3ST6 E4F1 NTN3 MAPK8IP3 LOC105371049 SYNGR3 EME2 RPL23AP5 CHTF18 MIR3180-5 SPSB3 HBQ1 MIR662 METTL26 LOC105371047 ABCA3 SNHG9 AMDHD2 PRSS27 PRR35 HBZ PKD1 ABCA17P PTX4 C16orf91 KCTD5 GNPTG
dgv4859n54 Chr.16:1971892 - 2264400 on Build GRCh38 Loss GFER MIR1225 TRAF7 MIR4516 SLC9A3R2 MLST8 DNASE1L2 MIR6511B1 NPW E4F1 RNPS1 TBL3 LOC105371049 TSC2 SYNGR3 SNORD60 PGP MIR3180-5 ECI1 RAB26 SNHG19 CASKIN1 BRICD5 ZNF598 PKD1 NOXO1 NTHL1
dgv4861n54 Chr.16:2083900 - 2246850 on Build GRCh38 Loss SNORD60 PGP MIR3180-5 ECI1 RAB26 MIR1225 SNHG19 CASKIN1 TRAF7 MIR4516 MLST8 DNASE1L2 MIR6511B1 BRICD5 E4F1 PKD1 LOC105371049 TSC2
dgv4863n54 Chr.16:2141733 - 2274302 on Build GRCh38 Loss SNORD60 PGP ECI1 RAB26 SNHG19 CASKIN1 TRAF7 LOC106660606 MLST8 DNASE1L2 BRICD5 MIR940 E4F1 RNPS1 MIR3677
nsv571190 Chr.16:2055054 - 2200730 on Build GRCh38 Loss SNORD60 MIR3180-5 RAB26 MIR1225 SNHG19 CASKIN1 TRAF7 PKD1 MIR4516 LOC105371049 TSC2 MIR6511B1
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain MIR6768 CEMP1 MIR1225 TRAF7 MIR4516 MLST8 DNASE1L2 MIR6511B1 CCNF PDPK1 MIR6767 C16orf59 E4F1 NTN3 RNPS1 MIR3677 LOC105371049 TSC2 SNORD60 PGP MIR3180-5 ECI1 RAB26 SNHG19 CASKIN1 LOC106660606 ABCA3 LOC652276 BRICD5 MIR4717 MIR3178 MIR940 ATP6V0C AMDHD2 PKD1 ABCA17P LOC729652 TBC1D24
nsv457351 Chr.16:2156590 - 2274302 on Build GRCh38 Loss BRICD5 PGP MIR940 ECI1 CASKIN1 E4F1 RNPS1 TRAF7 LOC106660606 MIR3677 MLST8 DNASE1L2
nsv952902 Chr.16:2143400 - 2339999 on Build GRCh38 Deletion SNORD60 PGP ECI1 RAB26 SNHG19 CASKIN1 TRAF7 LOC106660606 MLST8 ABCA3 DNASE1L2 BRICD5 MIR4717 MIR940 E4F1 RNPS1 MIR3677

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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