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See other PRPF31 CNV Assays ›
Gene Symbol
PRPF31
Assay Reference Genome
Location

Chr.19:54131628 on build GRCh38
Cytoband
19q13.42
Assay ID Hs01455837_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 26121

Gene Name:

 pre-mRNA processing factor 31

Gene Aliases:

 NY-BR-99, PRP31, RP11, SNRNP61

Location:

 Chr.19:54115410-54131719 on Build GRCh38

Assay Gene Location:

 Within Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PRPF31 NM_015629.3 14 2092 NP_056444.3
XM_006723137.3 14 2002 XP_006723200.1
AB593024.1 14 3097
AB593025.1 14 1748
AF308303.1 11 1757 AAG48270.1
AK098547.1 11 1322 BAC05329.1
AK301709.1 14 1689
AL050369.1 14 1731 CAB43677.1
AY040822.1 14 2053 AAK77986.1
CB854773.1 1 110

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv510773 Chr.19:54017180 - 54132236 on Build GRCh38 Deletion PRPF31 NDUFA3 VSTM1 OSCAR TFPT TARM1
nsv515623 Chr.19:54102901 - 54179150 on Build GRCh38 Loss PRPF31 NDUFA3 LENG1 MBOAT7 CNOT3 TMC4 TFPT
nsv953613 Chr.19:54097214 - 54198733 on Build GRCh38 Deletion PRPF31 NDUFA3 LENG1 MBOAT7 CNOT3 TSEN34 TMC4 OSCAR TFPT
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion CACNG7 NDUFA3 MIR518B BIRC8 MIR519A2 MIR515-1 MIR1323 OSCAR TFPT LOC105372457 LILRA5 MIR518E MIR516B2 MIR935 MIR519A1 TMC4 ZNF813 DPRX MIR515-2 MIR519E MIR518F MIR526A2 MIR520B MIR516A1 FAM90A27P MIR520E MIR518C MIR512-2 ZNF665 ZNF331 MIR519D TARM1 MBOAT7 MIR512-1 MIR517A LOC284379 MIR371A MIR520G MIR520A MIR527 MIR1283-2 MIR516B1 ZNF525 PRPF31 MIR522 ZNF845 ZNF818P MIR518D MIR519B VN1R2 MYADM CACNG6 MIR521-2 MIR523 CACNG8 MIR525 ZNF761 MIR526B PRKCG MIR520F MIR520D MIR524 MIR4752 MIR520H MIR373 VN1R4 MIR1283-1 MIR372 CNOT3 MIR521-1 MIR517C MIR516A2 LILRB3 TPM3P9 VSTM1 MIR517B LILRB5 LILRB2 LENG1 MIR498 NLRP12 TSEN34 MIR518A1 RPS9 MIR520C MIR519C LILRA6 MIR371B ZNF765 MIR518A2 MIR526A1 ZNF677
nsv2545 Chr.19:54122949 - 54142607 on Build GRCh38 Insertion PRPF31 CNOT3

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