Hs01462923_cn

• Gene Symbol: SCG5
• Assay Reference Genome Location: Chr.15:32643644 on build GRCh38
• Cytoband: 15q13.3

Target Gene Details

• Entrez Gene ID: 6447
• Gene Name: secretogranin V
• Gene Aliases: 7B2, P7B2, SGNE1, SgV
• Location: Chr.15:32641669-32697097 on Build GRCh38
• Assay Gene Location: Overlaps Intron 1 - Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SCG5	NM_001144757.1			NP_001138229.1
	NM_003020.3			NP_003011.1
	AK314965.1
	BC005349.1			AAH05349.1
	BC093053.1			AAH93053.1
	BP377248.1
	CR541824.1			CAG46623.1
	Y00757.1			CAA68726.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv517740	Chr.15:31727863 - 32666510 on Build GRCh38	Gain+Loss	WHAMMP1 LOC101060588 LOC101928042 LOC105370940 LOC100653133 GOLGA8K CHRNA7 LOC105370757 SCG5 ARHGAP11A GOLGA8N GOLGA8O ULK4P1 LOC100996255
nsv568913	Chr.15:32633875 - 33060788 on Build GRCh38	Gain	SCG5 LOC100131315 ARHGAP11A FMN1 GREM1 LOC105370757
nsv428302	Chr.15:31646275 - 32694378 on Build GRCh38	Gain+Loss	WHAMMP1 LOC101060588 OTUD7A LOC101928042 LOC105370940 LOC100653133 GOLGA8K CHRNA7 LOC105370757 SCG5 ARHGAP11A GOLGA8N GOLGA8O ULK4P1 LOC100996255
esv2760023	Chr.15:31474097 - 32694378 on Build GRCh38	Gain+Loss	WHAMMP1 LOC101060588 OTUD7A LOC101928042 LOC105370940 LOC100653133 GOLGA8K CHRNA7 LOC105370757 SCG5 ARHGAP11A GOLGA8N GOLGA8O ULK4P1 LOC100996255
nsv1052620	Chr.15:32612402 - 34538731 on Build GRCh38	Gain	SLC12A6 TMCO5B LOC101928042 EMC4 NOP10 AVEN MIR1233-2 LOC105370757 RYR3 SCG5 EMC7 LOC100131315 MIR1233-1 ARHGAP11A NUTM1 PGBD4 GOLGA8B CHRM5 FMN1 LPCAT4 GREM1 LOC101928134 GOLGA8A KATNBL1
nsv483039	Chr.15:32574635 - 32751321 on Build GRCh38	Gain	SCG5 LOC100131315 ARHGAP11A LOC101928042 GOLGA8N GREM1 LOC100996255 LOC105370757
esv33337	Chr.15:31689863 - 34575097 on Build GRCh38	Gain+Loss	SLC12A6 WHAMMP1 TMCO5B EMC4 NOP10 AVEN GOLGA8K MIR1233-2 LOC105370757 RYR3 SCG5 EMC7 LOC100131315 MIR1233-1 ARHGAP11A NUTM1 GOLGA8N PGBD4 GOLGA8B FMN1 LPCAT4 GREM1 LOC101928134 LOC100996255 KATNBL1 LOC101060588 LOC101928042 LOC105370940 LOC100653133 CHRNA7 GOLGA8O CHRM5 ULK4P1 GOLGA8A
esv3892661	Chr.15:32393132 - 32776080 on Build GRCh38	Gain	WHAMMP1 LOC101060588 LOC101928042 LOC100653133 GOLGA8K LOC105370757 SCG5 LOC100131315 ARHGAP11A GOLGA8N GOLGA8O FMN1 GREM1 ULK4P1 LOC100996255
nsv469587	Chr.15:32529739 - 32694378 on Build GRCh38	Loss	SCG5 WHAMMP1 ARHGAP11A LOC101928042 GOLGA8N LOC100996255 LOC105370757
esv2422296	Chr.15:32506737 - 32929014 on Build GRCh38	Duplication	SCG5 LOC100131315 WHAMMP1 ARHGAP11A LOC101928042 GOLGA8N FMN1 GREM1 LOC100996255 LOC105370757
dgv4456n54	Chr.15:32604149 - 34557061 on Build GRCh38	Gain	SLC12A6 TMCO5B EMC4 NOP10 AVEN MIR1233-2 LOC105370757 RYR3 SCG5 EMC7 LOC100131315 MIR1233-1 ARHGAP11A NUTM1 GOLGA8N PGBD4 GOLGA8B FMN1 LPCAT4 GREM1 LOC101928134 KATNBL1 LOC101928042 CHRM5 GOLGA8A

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

chaperone

Gene Ontology Categories:

Process(es)

intracellular protein transport
neuropeptide signaling pathway
peptide hormone processing
negative regulation of catalytic activity
regulation of hormone secretion

Function(s)

enzyme inhibitor activity
protein binding
GTP binding
unfolded protein binding