Hs01471418_cn

• Gene Symbol: SLC38A10
• Assay Reference Genome Location: Chr.17:81245557 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 124565
• Gene Name: solute carrier family 38 member 10
• Gene Aliases: PP1744
• Location: Chr.17:81244811-81295433 on Build GRCh38
• Assay Gene Location: Within Exon 17

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC38A10	NM_001037984.2	16	3777	NP_001033073.1
	XM_005257019.1	17	3895	XP_005257076.1
	XM_011524288.1	17	3916	XP_011522590.1
	XM_011524289.1	16	3892	XP_011522591.1
	XM_011524290.1	15	3171	XP_011522592.1
	BI194553.1	1	538

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv2161	Chr.17:81238081 - 81282084 on Build GRCh38	Insertion	C17orf89 SLC38A10 TEPSIN
esv26223	Chr.17:80659041 - 81736487 on Build GRCh38	Gain+Loss	LOC105371925 C17orf89 BAIAP2 TMEM105 CHMP6 LOC100130370 TEPSIN FSCN2 MIR657 MIR1250 LOC400627 LOC107985022 PDE6G OXLD1 LOC100129503 LOC105371921 CCDC137 MIR3186 MIR4740 ACTG1 LOC107985021 LINC00482 BAHCC1 MIR6786 BAIAP2-AS1 TSPAN10 MIR338 AATK-AS1 RPTOR MIR3065 ARL16 LOC101928855 SLC25A10 SLC38A10 FAAP100 NPLOC4 MRPL12 HGS CEP131 AATK
esv3893051	Chr.17:81244320 - 81272804 on Build GRCh38	Gain	SLC38A10
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	STRA13 LOC105371925 C17orf89 MCRIP1 TMEM105 ARHGDIA CSNK1D LOC100130370 MAFG TEPSIN FSCN2 MYADML2 RAC3 ASPSCR1 PDE6G OXLD1 FASN CCDC137 MAFG-AS1 SIRT7 MIR3186 ACTG1 NOTUM BAHCC1 ZNF750 FOXK2 C17orf62 PCYT2 P4HB CD7 TSPAN10 LOC105371944 LOC101929511 SLC25A10 FAAP100 NPLOC4 PYCR1 HGS CEP131 LRRC45 LOC105376790 LOC101929552 OGFOD3 B3GNTL1 NPB MIR6787 UTS2R WDR45B MIR4525 CCDC57 SLC16A3 PPP1R27 HEXDC SECTM1 GPS1 ANAPC11 FN3K MIR4740 LOC105376791 GCGR LINC00482 TBCD NARF MIR6786 RAB40B RFNG AATK-AS1 DUS1L ARL16 ALYREF SNORD134 SLC38A10 MRPL12 FN3KRP DCXR TEX19 AATK
dgv46n68	Chr.17:81133921 - 81288932 on Build GRCh38	Loss	LOC105371925 C17orf89 SLC38A10 TEPSIN CEP131 AATK-AS1 AATK
nsv457971	Chr.17:81216762 - 81282974 on Build GRCh38	Loss	LOC105371925 C17orf89 SLC38A10 TEPSIN CEP131
nsv470619	Chr.17:81032233 - 81349843 on Build GRCh38	Loss	LOC105371925 LINC00482 C17orf89 BAIAP2 TMEM105 BAIAP2-AS1 TEPSIN MIR338 AATK-AS1 MIR657 MIR1250 MIR3065 SLC38A10 CEP131 AATK
nsv1160499	Chr.17:81235307 - 81320655 on Build GRCh38	Deletion	LINC00482 C17orf89 TMEM105 SLC38A10 TEPSIN
nsv1064123	Chr.17:81168449 - 81282457 on Build GRCh38	Gain	LOC105371925 C17orf89 SLC38A10 TEPSIN CEP131 AATK-AS1
nsv952389	Chr.17:81137501 - 81593774 on Build GRCh38	Deletion	MIR4740 ACTG1 LOC105371925 LINC00482 C17orf89 BAHCC1 TMEM105 LOC100130370 TEPSIN AATK-AS1 FSCN2 SLC38A10 FAAP100 NPLOC4 CEP131 MIR3186 AATK
nsv509677	Chr.17:81227139 - 81267309 on Build GRCh38	Insertion	LOC105371925 C17orf89 SLC38A10 TEPSIN

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

amino acid transporter

Gene Ontology Categories:

Process(es)

amino acid transmembrane transport
sodium ion transport
amino acid transport
bone development

Function(s)

amino acid transmembrane transporter activity