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See other PRKCZ CNV Assays ›
Gene Symbol
PRKCZ
Assay Reference Genome
Location

Chr.1:2073652 on build GRCh38
Cytoband
1p36.33
Assay ID Hs01472325_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5590

Gene Name:

 protein kinase C zeta

Gene Aliases:

 PKC-ZETA, PKC2

Location:

 Chr.1:2050470-2185395 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PRKCZ NM_001033581.1 NP_001028753.1
NM_002744.4 NP_002735.3
XM_011541773.1 XP_011540075.1
XM_011541775.2 XP_011540077.1
XM_011541776.1 XP_011540078.1
XM_017001789.1 XP_016857278.1
XM_017001790.1 XP_016857279.1
XM_017001792.1 XP_016857281.1
XM_017001796.1 XP_016857285.1
XM_017001802.1 XP_016857291.1
XM_017001803.1 XP_016857292.1
XM_017001804.1 XP_016857293.1
AK290995.1
AK294649.1
BC008058.2 AAH08058.1
BC014270.2 AAH14270.1
BT007082.1 AAP35745.1
CB152283.1
L14283.1 AAA36488.1
Z15108.1 CAA78813.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv951425 Chr.1:2018162 - 2112261 on Build GRCh38 Deletion LOC105378591 GABRD PRKCZ
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss SCNN1D MXRA8 LOC100287934 CFAP74 TNFRSF4 FNDC10 NOC2L LOC100129534 TTLL10 LOC105378591 ISG15 PLEKHN1 MIR200B SAMD11 LOC100506504 CCNL2 MIR6808 MIR6859-2 LOC105378589 LOC100288175 DDX11L1 SDF4 NADK CALML6 KLHL17 FAM87B FAM132A ANKRD65 LOC100133331 TMEM240 MIR1302-2 FAAP20 GNB1 LOC100134822 MIR429 TNFRSF18 CDK11A TMEM52 LOC100130417 LOC107984841 RNF223 MMP23A OR4F16 PRKCZ C1orf159 LOC107985728 MTND2P28 FAM41C LINC01342 PERM1 ACAP3 CPSF3L TTLL10-AS1 LOC148413 UBE2J2 LOC102724312 LOC101928626 LOC105378949 MORN1 TAS1R3 OR4F5 CPTP MMP23B MIR6723 MIR6727 SSU72 CDK11B FAM138A SLC35E2B MIR6726 SKI ATAD3B GABRD MIR200A LOC100132287 MTND1P23 LINC00115 MIB2 PUSL1 OR4F29 MIR6859-1 VWA1 AURKAIP1 ATAD3A LOC102725121 AGRN LOC107985729 LOC105378948 DVL1 MRPL20 HES4 SLC35E2 TMEM88B LOC729737 WASH7P LOC105378947 LOC105378592 LOC100288069 B3GALT6 LINC01128 LOC284600 ATAD3C
nsv834446 Chr.1:1960604 - 2156435 on Build GRCh38 Loss LOC105378591 CFAP74 LOC105378589 GABRD PRKCZ
nsv2520 Chr.1:2063294 - 2089621 on Build GRCh38 Insertion PRKCZ
esv2758913 Chr.1:1389149 - 2092899 on Build GRCh38 Gain+Loss TMEM240 MIB2 VWA1 CFAP74 FNDC10 ATAD3A LOC148413 GNB1 LOC102724312 LOC105378591 LOC107985729 LOC105378949 CDK11A TMEM52 MRPL20 MMP23B SLC35E2 MMP23A SSU72 CDK11B TMEM88B SLC35E2B CCNL2 LOC105378589 PRKCZ NADK ATAD3B CALML6 ANKRD65 GABRD ATAD3C
nsv509479 Chr.1:2072311 - 2176998 on Build GRCh38 Insertion PRKCZ

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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