Hs01486023_cn

• Gene Symbol: SLC38A9
• Assay Reference Genome Location: Chr.5:55633770 on build GRCh38
• Cytoband: 5q11.2

Target Gene Details

• Entrez Gene ID: 153129
• Gene Name: solute carrier family 38 member 9
• Gene Aliases: URLC11
• Location: Chr.5:55625845-55712344 on Build GRCh38
• Assay Gene Location: Overlaps Intron 19 - Exon 19

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC38A9	NM_001258286.1			NP_001245215.1
	NM_001258287.1			NP_001245216.1
	NM_001282429.1			NP_001269358.1
	NM_173514.3			NP_775785.2
	NR_047649.1
	XM_006714537.2			XP_006714600.1
	XM_006714538.3			XP_006714601.1
	XM_006714539.3			XP_006714602.1
	XM_011543173.1			XP_011541475.1
	XM_011543174.1			XP_011541476.1
	XM_011543176.1			XP_011541478.1
	XM_011543177.1			XP_011541479.1
	XM_011543178.1			XP_011541480.1
	XM_011543180.1			XP_011541482.1
	XM_011543182.1			XP_011541484.1
	XM_011543183.1			XP_011541485.1
	XM_011543184.1			XP_011541486.1
	XM_017009077.1			XP_016864566.1
	XM_017009078.1			XP_016864567.1
	XM_017009079.1			XP_016864568.1
	XM_017009080.1			XP_016864569.1
	XM_017009081.1			XP_016864570.1
	XM_017009082.1			XP_016864571.1
	AB105188.1
	AK075190.1			BAC11460.1
	AK122957.1
	AK127988.1
	AK301850.1
	BC066891.1
	BC101362.2			AAI01363.1
	BX641065.1			CAE46032.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv830304	Chr.5:55492810 - 55655813 on Build GRCh38	Gain+Loss	PLPP1 SLC38A9 MIR5687 RNF138P1
nsv830305	Chr.5:55543776 - 55743734 on Build GRCh38	Loss	DDX4 SLC38A9

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

amino acid transporter

Gene Ontology Categories:

Process(es)

amino acid transmembrane transport
amino acid transport
positive regulation of TOR signaling
cellular response to amino acid stimulus

Function(s)

protein binding
amino acid transmembrane transporter activity