Hs01504581_cn

• Gene Symbol: SLC38A10
• Assay Reference Genome Location: Chr.17:81245050 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 124565
• Gene Name: solute carrier family 38 member 10
• Gene Aliases: PP1744
• Location: Chr.17:81244811-81295433 on Build GRCh38
• Assay Gene Location: Within Exon 17

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC38A10	NM_001037984.2	16	4284	NP_001033073.1
	XM_005257019.1	17	4402	XP_005257076.1
	XM_011524288.1	17	4423	XP_011522590.1
	XM_011524289.1	16	4399	XP_011522591.1
	XM_011524290.1	15	3678	XP_011522592.1
	AF086389.1	1	386
	AI476273.1	1	63
	BM129331.1	1	242
	CA447446.1	1	257

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv2161	Chr.17:81238081 - 81282084 on Build GRCh38	Insertion	TEPSIN SLC38A10 C17orf89
esv26223	Chr.17:80659041 - 81736487 on Build GRCh38	Gain+Loss	PDE6G MRPL12 BAHCC1 AATK-AS1 C17orf89 SLC25A10 TMEM105 CCDC137 MIR3186 MIR6786 LOC101928855 TSPAN10 SLC38A10 MIR3065 LOC400627 OXLD1 LOC107985021 MIR657 MIR338 TEPSIN BAIAP2 MIR4740 LOC100129503 ARL16 FAAP100 AATK HGS LINC00482 CHMP6 CEP131 FSCN2 LOC100130370 RPTOR ACTG1 LOC107985022 BAIAP2-AS1 LOC105371921 MIR1250 LOC105371925 NPLOC4
esv3893051	Chr.17:81244320 - 81272804 on Build GRCh38	Gain	SLC38A10
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	LOC105376790 PDE6G MRPL12 LOC101929552 MCRIP1 C17orf89 MAFG-AS1 SLC25A10 TEX19 TMEM105 ZNF750 PPP1R27 FOXK2 ANAPC11 ALYREF MIR3186 P4HB MIR6786 MIR6787 PCYT2 TSPAN10 SLC38A10 MYADML2 LOC105376791 GPS1 ARHGDIA SLC16A3 MIR4740 STRA13 LRRC45 ARL16 FAAP100 AATK HGS MIR4525 LINC00482 DUS1L OGFOD3 SIRT7 CEP131 FSCN2 ACTG1 FN3K LOC105371925 C17orf62 CCDC57 DCXR NPB TBCD BAHCC1 HEXDC AATK-AS1 CCDC137 FN3KRP SNORD134 RAB40B ASPSCR1 UTS2R OXLD1 CSNK1D LOC105371944 RAC3 MAFG RFNG TEPSIN NARF GCGR LOC101929511 NOTUM CD7 SECTM1 FASN PYCR1 LOC100130370 B3GNTL1 WDR45B NPLOC4
dgv46n68	Chr.17:81133921 - 81288932 on Build GRCh38	Loss	TEPSIN CEP131 SLC38A10 AATK-AS1 C17orf89 AATK LOC105371925
nsv457971	Chr.17:81216762 - 81282974 on Build GRCh38	Loss	TEPSIN CEP131 SLC38A10 C17orf89 LOC105371925
nsv470619	Chr.17:81032233 - 81349843 on Build GRCh38	Loss	TEPSIN BAIAP2 AATK-AS1 C17orf89 TMEM105 AATK LINC00482 CEP131 SLC38A10 MIR3065 BAIAP2-AS1 MIR1250 LOC105371925 MIR657 MIR338
nsv1160499	Chr.17:81235307 - 81320655 on Build GRCh38	Deletion	TEPSIN SLC38A10 C17orf89 TMEM105 LINC00482
nsv1064123	Chr.17:81168449 - 81282457 on Build GRCh38	Gain	TEPSIN CEP131 SLC38A10 AATK-AS1 C17orf89 LOC105371925
nsv952389	Chr.17:81137501 - 81593774 on Build GRCh38	Deletion	TEPSIN MIR4740 BAHCC1 AATK-AS1 C17orf89 FAAP100 TMEM105 AATK LINC00482 MIR3186 CEP131 FSCN2 LOC100130370 ACTG1 SLC38A10 LOC105371925 NPLOC4
nsv509677	Chr.17:81227139 - 81267309 on Build GRCh38	Insertion	TEPSIN SLC38A10 C17orf89 LOC105371925

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

amino acid transporter

Gene Ontology Categories:

Process(es)

amino acid transmembrane transport
sodium ion transport
amino acid transport
bone development

Function(s)

amino acid transmembrane transporter activity