Hs01506446_cn

• Gene Symbol: TMEM256
• Assay Reference Genome Location: Chr.17:7403375 on build GRCh38
• Cytoband: 17p13.1

Target Gene Details

• Entrez Gene ID: 254863
• Gene Name: transmembrane protein 256
• Gene Aliases: C17orf61
• Location: Chr.17:7402974-7404131 on Build GRCh38
• Assay Gene Location: Overlaps Intron 2 - Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TMEM256	NM_152766.3			NP_689979.1
	BC030270.2			AAH30270.1
	BM749297.1
	CB140450.1
	EB386328.1

Target Gene Details

• Entrez Gene ID: 100529211
• Gene Name: TMEM256-PLSCR3 readthrough (NMD candidate)
• Gene Aliases: C17orf61-PLSCR3
• Location: Chr.17:7389727-7404131 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TMEM256-PLSCR3	NR_037719.1
	AK055822.1
	AK290117.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2422288	Chr.17:6789933 - 7646709 on Build GRCh38	Deletion	CLDN7 MPDU1 C17orf74 NEURL4 BCL6B CTDNEP1 FBXO39 FGF11 SNORA67 CLEC10A ALOX12P2 EIF5A CHRNB1 PHF23 SAT2 SLC2A4 ELP5 ATP1B2 TNFSF13 SLC16A13 LOC107983988 MIR497HG MIR195 RNASEK-C17orf49 ASGR2 KCTD11 ASGR1 DLG4 GABARAP SLC16A11 SENP3 SHBG MIR497 ALOX12-AS1 POLR2A TMEM256-PLSCR3 ALOX12 PLSCR3 DVL2 MIR324 RNASEK ACADVL SOX15 SENP3-EIF4A1 SNORD10 CD68 TMEM256 LOC100996842 TNFSF12 SNORA48 C17orf49 TMEM95 FXR2 TMEM102 SPEM1 GPS2 NLGN2 EIF4A1 TNK1 ZBTB4 ACAP1 TNFSF12-TNFSF13 SLC35G6 YBX2 TEKT1
nsv523672	Chr.17:7379825 - 7549660 on Build GRCh38	Loss	POLR2A TMEM256-PLSCR3 C17orf74 PLSCR3 FGF11 TMEM102 SPEM1 LOC107983988 CHRNB1 NLGN2 TNK1 ZBTB4 TNFSF12-TNFSF13 SLC35G6 TMEM256 TNFSF12
esv2662967	Chr.17:7403326 - 7408473 on Build GRCh38	Deletion	TMEM256-PLSCR3 NLGN2 TMEM256
esv1007381	Chr.17:7391600 - 7405025 on Build GRCh38	Deletion	TMEM256-PLSCR3 PLSCR3 TMEM256
nsv952118	Chr.17:7174582 - 7456981 on Build GRCh38	Deletion	CLDN7 TMEM256-PLSCR3 C17orf74 PLSCR3 NEURL4 DVL2 CTDNEP1 FGF11 MIR324 ACADVL EIF5A CHRNB1 PHF23 TMEM256 SLC2A4 ELP5 TMEM95 TMEM102 SPEM1 LOC107983988 GPS2 NLGN2 KCTD11 ASGR1 DLG4 TNK1 GABARAP ACAP1 YBX2
nsv470575	Chr.17:7388788 - 7432736 on Build GRCh38	Loss	LOC107983988 TMEM256-PLSCR3 C17orf74 PLSCR3 NLGN2 TNK1 TMEM256 SPEM1
nsv457659	Chr.17:7010333 - 7689462 on Build GRCh38	Loss	CLDN7 MPDU1 C17orf74 NEURL4 BCL6B CTDNEP1 FGF11 SNORA67 CLEC10A EIF5A CHRNB1 PHF23 TP53 SAT2 SLC2A4 ELP5 WRAP53 ATP1B2 TNFSF13 SLC16A13 LOC107983988 MIR497HG MIR195 RNASEK-C17orf49 ASGR2 KCTD11 ASGR1 DLG4 GABARAP SLC16A11 SENP3 SHBG MIR497 ALOX12-AS1 POLR2A TMEM256-PLSCR3 ALOX12 PLSCR3 DVL2 MIR324 RNASEK ACADVL SOX15 SENP3-EIF4A1 SNORD10 CD68 TMEM256 LOC100996842 TNFSF12 SNORA48 C17orf49 TMEM95 FXR2 TMEM102 SPEM1 GPS2 NLGN2 EIF4A1 TNK1 ZBTB4 ACAP1 TNFSF12-TNFSF13 SLC35G6 YBX2

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

molecular_function