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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88885981 on build GRCh38
Cytoband
16q24.3
Assay ID Hs01540161_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 7 - Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
NM_175931.2 NP_787127.1
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AB010420.1 BAA29062.1
AK308355.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1

Target Gene Details

Entrez Gene ID:

 101927793

Gene Name:

 uncharacterized LOC101927793

Gene Aliases:

 -

Location:

 Chr.16:88883515-88887136 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC101927793 NR_135194.1 3 1168
AK055866.1 3 1411

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss PIEZO1 PABPN1L CDT1 LOC101927793 CBFA2T3 LOC100129697 LOC107987238 GALNS TRAPPC2L LOC105371409 APRT
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain PIEZO1 PABPN1L MIR4722 SLC22A31 LOC400558 LINC00304 CDT1 CBFA2T3 GALNS LOC100289580 LOC105371409 ACSF3 LOC101927793 CDH15 CTU2 LOC100129697 LOC107987238 TRAPPC2L LOC339059 ZNF778 APRT
nsv1928 Chr.16:88865211 - 88897277 on Build GRCh38 Insertion PABPN1L LOC101927793 CBFA2T3
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss PABPN1L SLC22A31 LOC400558 LINC00304 CDT1 CBFA2T3 GALNS LOC105371409 ACSF3 LOC101927793 CDH15 LOC100129697 LOC107987238 TRAPPC2L APRT
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain PIEZO1 PABPN1L SLC22A31 LOC400558 LINC00304 CDT1 CBFA2T3 GALNS LOC100289580 LOC105371409 ANKRD11 ACSF3 LOC101927793 CDH15 LOC100129697 LOC107987238 TRAPPC2L LOC339059 ZNF778 LOC100287036 LOC105371414 APRT
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain PIEZO1 PABPN1L CDT1 LOC101927793 CBFA2T3 LOC107987238 GALNS TRAPPC2L APRT
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion PABPN1L CDT1 LOC101927793 CBFA2T3 LOC100129697 LOC107987238 GALNS TRAPPC2L LOC105371409 APRT
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss PABPN1L LOC400558 LINC00304 CDT1 CBFA2T3 GALNS LOC105371409 ACSF3 LOC101927793 CDH15 LOC100129697 LOC107987238 TRAPPC2L APRT
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss SPATA2L VPS9D1-AS1 MVD LOC100289580 LOC105371409 FANCA SNORD68 DPEP1 SPATA33 CDK10 LOC101927793 CTU2 SPG7 TUBB3 DEF8 ZNF276 GAS8 PIEZO1 SNAI3 AFG3L1P CBFA2T3 TUBB8P7 CHMP1A DBNDD1 FAM157C SPIRE2 LOC105371419 CDH15 URAHP VPS9D1 LOC339059 ZNF778 RPL13 LOC400558 LOC107984817 LINC00304 CDT1 PRDM7 IL17C GAS8-AS1 ACSF3 TCF25 LOC100129697 MC1R CPNE7 CYBA PABPN1L MIR4722 SLC22A31 LOC101927817 GALNS RNF166 ANKRD11 CENPBD1 LOC107987238 TRAPPC2L LOC100287036 LOC105371414 APRT SNAI3-AS1
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain PIEZO1 PABPN1L MIR4722 CDT1 CBFA2T3 GALNS LOC100289580 LOC105371409 LOC101927793 CTU2 LOC100129697 LOC107987238 TRAPPC2L LOC339059 APRT

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