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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88885981 on build GRCh38
Cytoband
16q24.3
Assay ID Hs01540161_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 7 - Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
NM_175931.2 NP_787127.1
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AB010420.1 BAA29062.1
AK308355.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1

Target Gene Details

Entrez Gene ID:

 101927793

Gene Name:

 uncharacterized LOC101927793

Gene Aliases:

 -

Location:

 Chr.16:88883515-88887136 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC101927793 NR_135194.1 3 1168
AK055866.1 3 1411

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss CBFA2T3 LOC101927793 LOC107987238 LOC100129697 PABPN1L CDT1 APRT TRAPPC2L PIEZO1 GALNS LOC105371409
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain LOC101927793 LOC107987238 SLC22A31 CTU2 LOC100289580 TRAPPC2L ZNF778 PIEZO1 LOC105371409 MIR4722 CDH15 CBFA2T3 LOC100129697 PABPN1L LOC400558 ACSF3 CDT1 LOC339059 LINC00304 APRT GALNS
nsv1928 Chr.16:88865211 - 88897277 on Build GRCh38 Insertion CBFA2T3 LOC101927793 PABPN1L
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss LOC101927793 LOC107987238 SLC22A31 TRAPPC2L LOC105371409 CDH15 CBFA2T3 LOC100129697 PABPN1L LOC400558 ACSF3 CDT1 LINC00304 APRT GALNS
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain LOC101927793 LOC107987238 SLC22A31 LOC105371414 LOC100289580 TRAPPC2L ZNF778 PIEZO1 LOC105371409 ANKRD11 CDH15 CBFA2T3 LOC100287036 LOC100129697 PABPN1L LOC400558 ACSF3 CDT1 LOC339059 LINC00304 APRT GALNS
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain CBFA2T3 LOC101927793 LOC107987238 PABPN1L CDT1 APRT TRAPPC2L PIEZO1 GALNS
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss LOC101927793 LOC107987238 TRAPPC2L LOC105371409 CDH15 CBFA2T3 LOC100129697 PABPN1L LOC400558 ACSF3 CDT1 LINC00304 APRT GALNS
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion CBFA2T3 LOC101927793 LOC107987238 LOC100129697 PABPN1L CDT1 APRT TRAPPC2L GALNS LOC105371409
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss RPL13 LOC107984817 CYBA LOC105371419 LOC105371414 ZNF276 CHMP1A LOC101927817 LOC100289580 URAHP ZNF778 MIR4722 IL17C FAM157C ANKRD11 VPS9D1 CBFA2T3 LOC400558 DEF8 GALNS RNF166 CDK10 LOC101927793 LOC107987238 SPIRE2 TRAPPC2L PIEZO1 LOC105371409 SPG7 LOC100287036 LOC100129697 SNAI3 APRT TUBB3 SPATA2L AFG3L1P DBNDD1 DPEP1 TUBB8P7 CTU2 CENPBD1 SNORD68 ACSF3 LOC339059 FANCA CPNE7 SPATA33 SLC22A31 SNAI3-AS1 MVD GAS8-AS1 PRDM7 CDH15 TCF25 PABPN1L VPS9D1-AS1 CDT1 LINC00304 GAS8 MC1R
dgv3065n100 Chr.16:88711587 - 88927172 on Build GRCh38 Gain LOC101927793 LOC107987238 CTU2 LOC100289580 TRAPPC2L PIEZO1 MIR4722 CBFA2T3 PABPN1L CDT1 LOC339059 APRT GALNS

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