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See other SAPCD2 CNV Assays ›
Gene Symbol
SAPCD2
Assay Reference Genome
Location

Chr.9:137065127 on build GRCh38
Cytoband
9q34.3
Assay ID Hs01549058_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 89958

Gene Name:

 suppressor APC domain containing 2

Gene Aliases:

 C9orf140, p42.3

Location:

 Chr.9:137062127-137070576 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SAPCD2 NM_178448.3 NP_848543.2
XM_011519180.2 XP_011517482.1
BC048267.1 AAH48267.1
DQ150361.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss LRRC26 UAP1L1 PRR31 CLIC3 NPDC1 SAPCD2 PTGDS ABCA2 MAN1B1-AS1 C9orf142 MIR3621 TMEM210 MAN1B1 LCNL1 LOC101930307 C9orf139 GRIN1 FUT7 ENTPD2 DPP7
nsv831761 Chr.9:137049674 - 137166473 on Build GRCh38 Loss UAP1L1 MAN1B1 LOC101930307 SAPCD2 GRIN1 ENTPD2 DPP7 MAN1B1-AS1
nsv616006 Chr.9:137057859 - 137083633 on Build GRCh38 Loss UAP1L1 SAPCD2
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss RNF208 PHPT1 TUBB4B C8G ENTPD8 LCN12 ANAPC2 PTGDS EXD3 C9orf173-AS1 LOC101930307 EDF1 SSNA1 FUT7 ENTPD2 MIR4479 PNPLA7 FBXW5 RNF224 PRR31 CLIC3 CCDC183 NOXA1 MAN1B1-AS1 NDOR1 MIR3621 MAN1B1 LCNL1 C9orf139 GRIN1 FAM166A TRAF2 DPP7 CYSRT1 TMEM203 RABL6 NPDC1 ABCA2 SLC34A3 LRRC26 UAP1L1 TOR4A SAPCD2 NELFB MIR7114 STPG3 NRARP MAMDC4 C9orf142 TMEM210 TPRN C9orf172 CCDC183-AS1 NSMF MIR4292
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion UAP1L1 C8G PRR31 CLIC3 NPDC1 SAPCD2 LCN12 PTGDS ABCA2 MAN1B1-AS1 C9orf142 MAN1B1 LCNL1 LOC101930307 C9orf139 FUT7 ENTPD2 DPP7
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss LCN15 PHPT1 C8G LCN12 PTGDS MIR6722 SNORA17A LOC101930307 EDF1 FUT7 ENTPD2 MIR4479 FBXW5 PRR31 CLIC3 NALT1 CARD9 CCDC183 MAN1B1-AS1 SNHG7 MIR4673 LCN8 MIR3621 MAN1B1 LCNL1 SNAPC4 AGPAT2 C9orf139 GRIN1 MIR126 TRAF2 DPP7 MIR4674 SEC16A LINC01451 RABL6 NPDC1 LOC100128593 ABCA2 SNORA17B LCN6 NOTCH1 EGFL7 LCN10 PMPCA LRRC26 INPP5E UAP1L1 TMEM141 SAPCD2 DNLZ MAMDC4 C9orf163 C9orf142 TMEM210 FAM69B C9orf172 CCDC183-AS1 MIR4292 SDCCAG3 HSPC324
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain LRRC26 UAP1L1 NPDC1 SAPCD2 ANAPC2 MAN1B1-AS1 MIR3621 TMEM210 MAN1B1 LOC101930307 C9orf139 GRIN1 SSNA1 FUT7 ENTPD2 DPP7
nsv616005 Chr.9:137036493 - 137173890 on Build GRCh38 Loss LRRC26 UAP1L1 NPDC1 SAPCD2 MAN1B1-AS1 MIR3621 TMEM210 MAN1B1 LOC101930307 C9orf139 GRIN1 ENTPD2 DPP7
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion RNF208 LCN15 PHPT1 TUBB4B C8G LCN12 ANAPC2 PTGDS EXD3 C9orf173-AS1 MIR6722 SNORA17A LOC101930307 EDF1 SSNA1 FUT7 ENTPD2 MIR4479 FBXW5 RNF224 PRR31 CLIC3 CCDC183 MAN1B1-AS1 SNHG7 NDOR1 LCN8 MIR3621 MAN1B1 LCNL1 AGPAT2 C9orf139 GRIN1 FAM166A MIR126 TRAF2 DPP7 LINC01451 CYSRT1 TMEM203 RABL6 NPDC1 LOC100128593 ABCA2 SNORA17B LCN6 EGFL7 LCN10 SLC34A3 LRRC26 UAP1L1 TOR4A TMEM141 SAPCD2 NELFB STPG3 NRARP MAMDC4 C9orf142 TMEM210 TPRN FAM69B C9orf172 CCDC183-AS1 MIR4292 HSPC324
nsv982354 Chr.9:137057355 - 137073859 on Build GRCh38 Duplication SAPCD2

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

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