Hs01552358_cn

• Gene Symbol: TSPAN3
• Assay Reference Genome Location: Chr.15:77046672 on build GRCh38
• Cytoband: 15q24.3

Target Gene Details

• Entrez Gene ID: 10099
• Gene Name: tetraspanin 3
• Gene Aliases: TM4-A, TM4SF8, TSPAN-3
• Location: Chr.15:77044017-77071228 on Build GRCh38
• Assay Gene Location: Within Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TSPAN3	NM_001168412.1	6	1007	NP_001161884.1
	NM_005724.5	7	1199	NP_005715.1
	NM_198902.2	6	1124	NP_944492.1
	XM_017021857.1	7	808	XP_016877346.1
	AF054840.1			AAC69716.1
	AF133423.1	7	999	AAF08362.1
	AK001305.1	7	1045	BAA91613.1
	AK001310.1	7	1031	BAA91615.1
	AK001326.1	7	1142	BAA91627.1
	AK027793.1	4	2250
	AK075336.1	7	1080
	AK075482.1	6	1005
	AK298157.1	6	888
	BC000704.2	7	1100	AAH00704.1
	BC004280.1	7	1061	AAH04280.1
	BC009248.2	7	1064	AAH09248.1
	BC011206.1	7	1093	AAH11206.1
	M69023.1	3	473

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv517068	Chr.15:76962203 - 77088880 on Build GRCh38	Gain+Loss	TSPAN3 PSTPIP1
esv2760041	Chr.15:76878209 - 77081106 on Build GRCh38	Gain	SCAPER TSPAN3 RCN2 PSTPIP1
nsv833058	Chr.15:76943554 - 77101298 on Build GRCh38	Loss	TSPAN3 RCN2 PEAK1 PSTPIP1
esv2749898	Chr.15:75764003 - 77933523 on Build GRCh38	Deletion	NRG4 TSPAN3 MIR3713 LOC645752 RCN2 FBXO22-AS1 UBE2Q2 PEAK1 LOC101929439 PSTPIP1 ETFA TMEM266 ISL2 LINGO1-AS1 SCAPER FBXO22 TYRO3P LINGO1 LINGO1-AS2 LOC101929457 HMG20A LOC441728 LINC00597
nsv1048833	Chr.15:77002252 - 77046918 on Build GRCh38	Gain	TSPAN3 PSTPIP1
nsv1040852	Chr.15:76867896 - 77845199 on Build GRCh38	Gain	LINGO1-AS1 SCAPER TSPAN3 LINGO1 RCN2 LINGO1-AS2 PEAK1 LOC101929457 HMG20A LINC00597 PSTPIP1
nsv1622	Chr.15:77022478 - 77051924 on Build GRCh38	Insertion	TSPAN3 PSTPIP1
nsv509576	Chr.15:76962019 - 77047336 on Build GRCh38	Insertion	TSPAN3 PSTPIP1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

cell surface receptor signaling pathway
biological_process

Function(s)

molecular_function