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See other TRAPPC2L CNV Assays ›
Gene Symbol
TRAPPC2L
Assay Reference Genome
Location

Chr.16:88858670 on build GRCh38
Cytoband
16q24.3
Assay ID Hs01552775_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 51693

Gene Name:

 trafficking protein particle complex 2-like

Gene Aliases:

 HSPC176

Location:

 Chr.16:88856220-88862686 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TRAPPC2L NM_001318524.1 NP_001305453.1
NM_001318525.1 NP_001305454.1
NM_001318526.1 NP_001305455.1
NM_001318527.1 NP_001305456.1
NM_001318528.1 NP_001305457.1
NM_001318529.1 NP_001305458.1
NM_001318530.1 NP_001305459.1
NM_001318532.1 NP_001305461.1
NM_016209.4 NP_057293.1
NR_134670.1
NR_134671.1
XM_017023270.1 XP_016878759.1
AF089106.1 AAF00568.1
AF161524.1 AAF29139.1
AK126779.1 BAC86686.1
AK307253.1
AK310805.1
AK311885.1
AX771012.1 CAE01175.1
AX771013.1 CAE01176.1
AX771014.1 CAE01177.1
BC011369.1 AAH11369.1
BC018024.1 AAH18024.1
BC105809.1 AAI05810.1
BG283878.1
BI754306.1
BX340702.2
BX384775.2
BX419849.2
DA209193.1
DA293122.1
DA295904.1
DA833474.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss TRAPPC2L LOC105371409 LOC107987238 CBFA2T3 PABPN1L LOC100129697 APRT LOC101927793 CDT1 PIEZO1 GALNS
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain SLC22A31 TRAPPC2L LOC100289580 LOC107987238 LOC339059 CDH15 CBFA2T3 PABPN1L LOC100129697 MIR4722 APRT PIEZO1 GALNS ACSF3 CTU2 LOC105371409 LOC400558 LINC00304 LOC101927793 CDT1 ZNF778
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss SLC22A31 TRAPPC2L LOC107987238 CDH15 CBFA2T3 PABPN1L LOC100129697 APRT GALNS ACSF3 LOC105371409 LOC400558 LINC00304 LOC101927793 CDT1
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain SLC22A31 TRAPPC2L LOC100289580 LOC107987238 LOC105371414 LOC339059 CDH15 CBFA2T3 PABPN1L LOC100129697 APRT PIEZO1 GALNS ACSF3 LOC105371409 LOC400558 LOC100287036 LINC00304 LOC101927793 CDT1 ANKRD11 ZNF778
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain TRAPPC2L LOC107987238 CBFA2T3 PABPN1L APRT LOC101927793 CDT1 PIEZO1 GALNS
nsv819907 Chr.16:88805821 - 88860813 on Build GRCh38 Gain TRAPPC2L LOC107987238 APRT CDT1 GALNS
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion TRAPPC2L LOC105371409 LOC107987238 CBFA2T3 PABPN1L LOC100129697 APRT LOC101927793 CDT1 GALNS
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss SLC22A31 SPATA2L LOC339059 PABPN1L IL17C TUBB8P7 CHMP1A AFG3L1P SPIRE2 URAHP LOC400558 LOC101927793 LOC107984817 LOC100289580 LOC105371414 LOC105371419 SNAI3 SNORD68 LOC100129697 MIR4722 DPEP1 CENPBD1 LOC105371409 PRDM7 CDK10 RNF166 CPNE7 CDH15 RPL13 FANCA GALNS ACSF3 CTU2 MVD SPG7 SNAI3-AS1 SPATA33 ZNF276 TUBB3 LINC00304 CDT1 ANKRD11 ZNF778 VPS9D1 TRAPPC2L FAM157C LOC107987238 GAS8-AS1 DEF8 GAS8 CBFA2T3 APRT PIEZO1 LOC101927817 VPS9D1-AS1 MC1R TCF25 LOC100287036 DBNDD1 CYBA
esv3639561 Chr.16:88837996 - 88882065 on Build GRCh38 Gain TRAPPC2L CBFA2T3 PABPN1L GALNS
nsv1063441 Chr.16:88767066 - 88861882 on Build GRCh38 Loss TRAPPC2L LOC107987238 APRT CDT1 PIEZO1 GALNS
dgv3065n100 Chr.16:88711587 - 88927172 on Build GRCh38 Gain TRAPPC2L LOC100289580 LOC107987238 LOC339059 CBFA2T3 PABPN1L MIR4722 APRT PIEZO1 GALNS CTU2 LOC101927793 CDT1

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

membrane traffic protein

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