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See other SLC38A2 CNV Assays ›
Gene Symbol
SLC38A2
Assay Reference Genome
Location

Chr.12:46359686 on build GRCh38
Cytoband
12q13.11
Assay ID Hs01569046_cn
Size
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 54407

Gene Name:

 solute carrier family 38 member 2

Gene Aliases:

 ATA2, PRO1068, SAT2, SNAT2

Location:

 Chr.12:46358188-46372862 on Build GRCh38

Assay Gene Location:

 Within Exon 16
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC38A2 NM_001307936.1 15 3270 NP_001294865.1
NM_018976.4 16 3386 NP_061849.2
AB037803.2 15 2946 BAA92620.2
AF116620.2 1 936 AAF71044.1
AF259799.1 15 2966 AAK38510.1
AF298897.1 16 3297 AAG24618.1
AJ344099.1 16 3298 CAC51434.1
AK001700.1 15 3179 BAA91846.1
AK172784.1 9 2393 BAD18765.1
BC040342.1 16 3288 AAH40342.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv832398 Chr.12:46217909 - 46431747 on Build GRCh38 Gain SLC38A1 LOC102723757 LOC100288798 SLC38A2

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More Information


Additional Information:

For this assay, SNP(s) [rs76658095] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

amino acid transporter

Gene Ontology Categories:

Function(s) Process(es)


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