Genomic Map
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Target Gene Details
Entrez Gene ID: | 199990 |
Gene Name: | Fanconi anemia core complex associated protein 20 |
Gene Aliases: |
C1orf86, FP7162 |
Location: |
Chr.1:2184460-2212720 on Build GRCh38 |
Assay Gene Location: | Within Exon 14 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| FAAP20 | NM_001146310.1 | NP_001139782.1 | ||
| NM_001256945.1 | NP_001243874.1 | |||
| NM_001256947.1 | 3 | 419 | NP_001243876.1 | |
| NM_001282670.1 | 8 | 3401 | NP_001269599.1 | |
| NM_001282671.1 | NP_001269600.1 | |||
| NM_001282672.1 | NP_001269601.1 | |||
| NM_001282673.1 | NP_001269602.1 | |||
| NM_182533.2 | 4 | 555 | NP_872339.2 | |
| NR_046427.1 | 4 | 748 | ||
| XM_006710419.3 | 6 | 1271 | XP_006710482.1 | |
| XM_006710421.3 | 5 | 661 | XP_006710484.1 | |
| XM_011540914.2 | 10 | 1222 | XP_011539216.1 | |
| XM_011540921.2 | 7 | 1071 | XP_011539223.1 | |
| XM_011540922.1 | 5 | 685 | XP_011539224.1 | |
| XM_017000553.1 | 8 | 1069 | XP_016856042.1 | |
| XM_017000554.1 | XP_016856043.1 | |||
| XM_017000557.1 | 4 | 555 | XP_016856046.1 | |
| AF461903.1 | 4 | 2369 | AAQ04817.1 | |
| AF469129.1 | AAP97719.1 | |||
| AK054818.1 | 1 | 2025 | ||
| AK055593.1 | BAB70965.1 | |||
| AK125445.1 | 1 | 2872 | ||
| AK126870.1 | 8 | 3400 | BAC86730.1 | |
| AK127994.1 | BAC87220.1 | |||
| AK128507.1 | 1 | 3863 | ||
| AL545931.3 | 4 | 711 | ||
| BC066360.1 | 4 | 552 | AAH66360.1 | |
| BC103992.2 | AAI03993.1 | |||
| BG825658.1 | ||||
| BU192678.1 | ||||
| BU542153.1 | 3 | 380 | ||
| BU626113.1 | 1 | 191 | ||
| CN397640.1 | 3 | 398 | ||
| DA596011.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv482937 | Chr.1:10001 - 2368561 on Build GRCh38 | Loss |
 SDF4
HES4
TNFRSF4
ANKRD65
MIR6859-2
SLC35E2B
LOC100129534
LOC148413
MMP23A
MIR6859-1
MXRA8
PLEKHN1
LOC107985729
LOC100132287
MIR200B
B3GALT6
MIR429
SLC35E2
ATAD3B
RNF223
GABRD
SAMD11
LOC101928626
ATAD3A
MTND1P23
CDK11B
SKI
LOC105378591
LOC105378947
NOC2L
PRKCZ
CDK11A
LOC100130417
LOC105378589
LINC00115
MIR6726
MORN1
MIR200A
OR4F29
LOC105378592
CFAP74
SSU72
AURKAIP1
PERM1
FAM87B
DVL1
WASH7P
MIR6727
GNB1
CCNL2
UBE2J2
LOC105378949
MIR1302-2
ATAD3C
FNDC10
LOC100287934
TMEM88B
CPSF3L
TAS1R3
MIB2
MRPL20
AGRN
KLHL17
PUSL1
CALML6
OR4F16
MIR6723
LINC01128
SCNN1D
FAM41C
LOC100506504
VWA1
ACAP3
MIR6808
MMP23B
LOC102724312
DDX11L1
LOC107985728
LOC284600
FAAP20
LOC105378948
C1orf159
MTND2P28
TTLL10
LOC729737
OR4F5
LINC01342
LOC100288175
LOC102725121
CPTP
LOC100133331
FAM138A
TTLL10-AS1
TNFRSF18
LOC107984841
NADK
FAM132A
ISG15
TMEM240
TMEM52
LOC100134822
LOC100288069
|
| dgv49n54 | Chr.1:2151050 - 2289783 on Build GRCh38 | Loss |
PRKCZ
FAAP20
LOC100506504
LOC105378592
SKI
|
| nsv951530 | Chr.1:2153662 - 2229961 on Build GRCh38 | Deletion |
PRKCZ
FAAP20
LOC100506504
LOC105378592
SKI
|
| nsv470682 | Chr.1:2188394 - 2378754 on Build GRCh38 | Loss |
LOC100129534
FAAP20
MORN1
LOC105378592
SKI
|
| nsv834557 | Chr.1:2117631 - 2311104 on Build GRCh38 | Loss |
PRKCZ
FAAP20
LOC100506504
LOC105378592
SKI
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Gene Ontology Categories:
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