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See other IRF3 CNV Assays ›
Gene Symbol
IRF3
Assay Reference Genome
Location

Chr.19:49659763 on build GRCh38
Cytoband
19q13.33
Assay ID Hs01593351_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 3661

Gene Name:

 interferon regulatory factor 3

Gene Aliases:

 IIAE7

Location:

 Chr.19:49659569-49665875 on Build GRCh38

Assay Gene Location:

 Within Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
IRF3 NM_001197122.1 8 1438 NP_001184051.1
NM_001197123.1 8 1480 NP_001184052.1
NM_001197124.1 7 1041 NP_001184053.1
NM_001197125.1 7 1249 NP_001184054.1
NM_001197126.1 6 1077 NP_001184055.1
NM_001197127.1 6 868 NP_001184056.1
NM_001197128.1 5 696 NP_001184057.1
NM_001571.5 8 1422 NP_001562.1
NR_045568.1 8 1569
XM_006723197.1 8 1416 XP_006723260.1
XM_006723198.1 8 1352 XP_006723261.1
XM_006723200.1 7 1101 XP_006723263.1
XM_006723201.1 7 1174 XP_006723264.1
XM_006723202.2 8 1323 XP_006723265.1
XM_017026766.1 8 1391 XP_016882255.1
XM_017026767.1 8 1336 XP_016882256.1
AA568913.1 1 200
AB102886.1 3 350 BAD89415.1
AB102887.1 6 788 BAD89416.1
AK292027.1 8 1551
AK314421.1 8 1335
BC000660.2 8 1340 AAH00660.1
BC009395.2 8 1365 AAH09395.1
BC071721.1 7 1511 AAH71721.1
BM477213.1 3 300
BU859806.1 3 573
HM357932.1 8 1310
HM357933.1 5 526
HM357934.1 6 907
HM357935.1 6 698
HM357936.1 7 871
HM357937.1 7 1079
Z56281.1 8 1215 CAA91227.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss RRAS NOSIP IRF3 BCL2L12 MIR5088 PRRG2 CPT1C PRMT1 SCAF1 ADM5 PRR12
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss RRAS NOSIP IRF3 BCL2L12 MIR5088 PRRG2 CPT1C PRMT1 SCAF1 ADM5 PRR12
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss CARD8 MAMSTR SNAR-B2 SNAR-A5 BSPH1 SNAR-C5 CA11 PNKP FUT2 PLA2G4C GRWD1 C19orf68 FLJ26850 SNAR-A8 CYTH2 AP2A1 PIH1D1 LMTK3 BAX HRC SNORD34 PPP1R15A SPHK2 SNAR-A6 CARD8-AS1 CD37 KCNA7 SNORD35A CPT1C AKT1S1 PTH2 VRK3 RCN3 ALDH16A1 SNORD32A CGB2 PTOV1-AS1 LOC101059948 EMP3 CGB7 RPS11 SNAR-C1 GYS1 KCNJ14 CCDC155 LIN7B DKKL1 PRMT1 CGB5 DBP FCGRT CGB1 SNAR-A9 TULP2 SNORD33 LOC105372430 TRPM4 SEC1P IRF3 SNAR-C4 CCDC114 SNAR-A10 SULT2B1 CABP5 NUCB1-AS1 MED25 TEAD2 HSD17B14 BCL2L12 SNAR-D ZNF473 PTOV1-AS2 FLT3LG SYNGR4 TMEM143 LIG1 SNAR-A1 RPL13A FUT1 ADM5 MIR4749 RUVBL2 RPL18 SNAR-A2 SNAR-C3 IZUMO1 MIR5088 PRRG2 SNAR-A3 CGB3 SNORD35B SPACA4 PRR12 PPFIA3 SNAR-C2 CGB8 ZNF114 TSKS SNRNP70 SNAR-A11 SLC6A16 PLA2G4C-AS1 NUCB1 GFY SNAR-A12 SNAR-A7 LHB SNAR-A14 ATF5 KDELR1 C19orf73 SIGLEC11 NTN5 SNAR-B1 MIR4324 MIR6799 MIR6800 RRAS PLEKHA4 LOC105447645 RASIP1 SNAR-G1 MIR6798 PTOV1 BCAT2 FAM83E MIR4750 TBC1D17 SNAR-G2 MIR4751 SCAF1 SNAR-A13 SIGLEC16 FGF21 GRIN2D MIR150 NOSIP LOC101928295 FTL IL4I1 NTF4 FUZ LOC100287477 SLC17A7 ELSPBP1 DHDH SNAR-A4 NUP62
nsv470150 Chr.19:49618821 - 49856789 on Build GRCh38 Gain RRAS IRF3 PTOV1-AS1 PTOV1 TSKS ADM5 MIR4749 FUZ MED25 BCL2L12 MIR5088 PTOV1-AS2 CPT1C PRMT1 SCAF1 AP2A1 PRR12 MIR6799 MIR6800
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain RRAS NOSIP IRF3 BCL2L12 MIR5088 PRRG2 CPT1C PRMT1 SCAF1 ADM5 PRR12
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion RRAS PTOV1-AS1 PNKP PTOV1 ADM5 MIR4749 MIR4750 TBC1D17 MIR5088 PRRG2 PRMT1 MIR4751 SCAF1 AP2A1 PRR12 NOSIP IRF3 IL4I1 TSKS FUZ MED25 BCL2L12 PTOV1-AS2 CPT1C AKT1S1 ATF5 NUP62 MIR6799 MIR6800
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion RRAS SNORD32A PTOV1-AS1 RPL13A ADM5 RPS11 MIR5088 PRRG2 SNORD35B PRMT1 SCAF1 AP2A1 FCGRT PRR12 SNORD33 MIR150 NOSIP IRF3 SNORD34 TSKS FUZ MED25 BCL2L12 SNORD35A CPT1C RCN3 MIR6799 MIR6800
nsv828578 Chr.19:49560777 - 49680548 on Build GRCh38 Loss RRAS NOSIP IRF3 BCL2L12 PRRG2 PRMT1 SCAF1 PRR12
nsv579908 Chr.19:49645135 - 49663393 on Build GRCh38 Loss IRF3 SCAF1

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