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See other PLEKHN1 CNV Assays ›
Gene Symbol
PLEKHN1
Assay Reference Genome
Location

Chr.1:972867 on build GRCh38
Cytoband
1p36.33
Assay ID Hs01603726_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 84069

Gene Name:

 pleckstrin homology domain containing N1

Gene Aliases:

 -

Location:

 Chr.1:965820-975108 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 9 - Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PLEKHN1 NM_001160184.1 NP_001153656.1
NM_032129.2 NP_115505.2
XM_006710944.3 XP_006711007.2
XM_011542248.2 XP_011540550.2
XM_017002474.1 XP_016857963.1
XM_017002475.1 XP_016857964.1
XM_017002476.1 XP_016857965.1
XM_017002477.1 XP_016857966.1
XM_017002478.1 XP_016857967.1
AL136730.1 CAB66664.1
BC101386.2 AAI01387.1
BC101387.2 AAI01388.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain PERM1 SAMD11 LOC284600 LOC107985728 ISG15 C1orf159 LOC105378948 HES4 AGRN RNF223 PLEKHN1 NOC2L LOC100130417 KLHL17 LOC100288175
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss PERM1 PRKCZ LOC107985728 FNDC10 LOC102724312 MIR6859-1 SKI MIR6808 CPSF3L LOC105378947 TMEM52 MIB2 OR4F29 OR4F5 TMEM240 LOC105378589 FAM41C LOC100133331 DVL1 LOC107985729 SLC35E2B TTLL10 MMP23B VWA1 LOC148413 LOC105378592 B3GALT6 CDK11A MIR6723 C1orf159 MIR200B ATAD3B FAM87B CCNL2 LINC01128 CDK11B MIR1302-2 LOC107984841 PLEKHN1 OR4F16 UBE2J2 CALML6 LOC100288175 MIR6726 WASH7P ATAD3A MORN1 DDX11L1 MTND2P28 SDF4 LOC105378591 MRPL20 LINC01342 AURKAIP1 SAMD11 CPTP ISG15 LOC102725121 SSU72 LOC100287934 MTND1P23 LOC105378948 LOC100134822 HES4 TTLL10-AS1 TNFRSF4 LOC105378949 KLHL17 ACAP3 FAM138A MIR200A TNFRSF18 PUSL1 AGRN RNF223 MIR6859-2 TMEM88B MMP23A LOC100129534 ANKRD65 FAAP20 MIR6727 LOC100288069 FAM132A GABRD LINC00115 SLC35E2 SCNN1D MXRA8 ATAD3C TAS1R3 LOC101928626 NOC2L GNB1 NADK LOC100132287 MIR429 LOC284600 LOC729737 CFAP74 LOC100130417 LOC100506504
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion PERM1 SAMD11 LOC284600 LOC107985728 ISG15 C1orf159 LOC105378948 HES4 AGRN RNF223 PLEKHN1 NOC2L LOC100130417 KLHL17 LOC100288175
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion PERM1 SAMD11 PLEKHN1 LOC284600 LOC107985728 NOC2L LOC100130417 KLHL17
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain PERM1 SAMD11 LOC107985728 ISG15 C1orf159 MIR200B LOC105378948 HES4 TTLL10-AS1 PLEKHN1 TNFRSF4 NOC2L FAM41C KLHL17 MIR200A LOC100288175 MIR429 LOC284600 TNFRSF18 TTLL10 AGRN RNF223 SDF4 LINC01342 LOC100130417
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain PERM1 SAMD11 MIR6723 LINC00115 LOC107985728 ISG15 C1orf159 FAM87B LOC100287934 MTND1P23 LOC105378948 HES4 LINC01128 LOC105378947 LOC107984841 PLEKHN1 OR4F16 LOC101928626 NOC2L FAM41C KLHL17 LOC100133331 LOC100288175 LOC284600 MTND2P28 AGRN RNF223 LOC100130417 LOC100288069
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss PERM1 SAMD11 LOC107985728 CPTP ISG15 FNDC10 LOC102724312 SSU72 MIR6808 LOC100287934 CPSF3L LOC105378948 HES4 TTLL10-AS1 MIB2 TNFRSF4 TMEM240 FAM41C KLHL17 ACAP3 MIR200A DVL1 LOC107985729 TNFRSF18 SLC35E2B TTLL10 PUSL1 MMP23B VWA1 AGRN RNF223 LOC148413 TMEM88B MMP23A ANKRD65 MIR6727 LOC100288069 B3GALT6 CDK11A FAM132A LINC00115 C1orf159 MIR200B ATAD3B SLC35E2 FAM87B CCNL2 LINC01128 CDK11B SCNN1D MXRA8 ATAD3C PLEKHN1 TAS1R3 NOC2L NADK UBE2J2 LOC100288175 MIR6726 MIR429 ATAD3A LOC284600 SDF4 MRPL20 LINC01342 LOC100130417 AURKAIP1
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss PERM1 SAMD11 LINC00115 LOC107985728 ISG15 C1orf159 MIR200B FAM87B LOC105378948 HES4 LINC01128 TTLL10-AS1 PLEKHN1 TNFRSF4 NOC2L FAM41C KLHL17 MIR200A UBE2J2 LOC100288175 MIR429 LOC284600 TNFRSF18 TTLL10 AGRN RNF223 SDF4 LINC01342 LOC100130417 B3GALT6 FAM132A
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain PERM1 SAMD11 ISG15 C1orf159 LOC105378948 HES4 AGRN RNF223 PLEKHN1 NOC2L LINC01342 KLHL17 LOC100288175
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain PERM1 SAMD11 LOC107985728 CPTP ISG15 C1orf159 MIR200B MIR6808 CCNL2 CPSF3L LOC105378948 HES4 TTLL10-AS1 SCNN1D MXRA8 PLEKHN1 TAS1R3 TNFRSF4 NOC2L KLHL17 ACAP3 MIR200A UBE2J2 LOC100288175 MIR6726 DVL1 MIR429 LOC284600 TNFRSF18 TTLL10 PUSL1 AGRN RNF223 LOC148413 TMEM88B SDF4 MRPL20 LINC01342 LOC100130417 ANKRD65 MIR6727 AURKAIP1 B3GALT6 FAM132A
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss PERM1 SAMD11 PLEKHN1 LOC284600 LOC107985728 ISG15 NOC2L LOC100130417 KLHL17 HES4 AGRN
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion PERM1 SAMD11 MIR429 TNFRSF18 ISG15 C1orf159 MIR200B TTLL10 LOC105378948 HES4 TTLL10-AS1 AGRN RNF223 PLEKHN1 TNFRSF4 NOC2L SDF4 LINC01342 KLHL17 MIR200A LOC100288175
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain PERM1 SAMD11 PLEKHN1 LOC284600 LOC107985728 NOC2L LOC100130417 FAM41C KLHL17 HES4 LINC01128

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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