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See other CDHR5 CNV Assays ›
Gene Symbol
CDHR5
Assay Reference Genome
Location

Chr.11:618066 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01610749_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 53841

Gene Name:

 cadherin related family member 5

Gene Aliases:

 MLPCDH, MU-PCDH, MUCDHL, MUPCDH

Location:

 Chr.11:616565-625067 on Build GRCh38

Assay Gene Location:

 Within Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDHR5 NM_001171968.1 14 2153 NP_001165439.1
NM_021924.4 14 2171 NP_068743.2
NM_031264.3 13 1589 NP_112554.2
XM_006718253.3 14 1831 XP_006718316.1
XM_011520188.2 14 1738 XP_011518490.1
XM_011520189.2 14 1645 XP_011518491.1
XM_011520190.2 12 1404 XP_011518492.1
XM_011520191.2 XP_011518493.1
AF258675.1 AAG16732.1
AF258676.1 15 2327 AAG16733.1
AF276242.1 13 1424 AAG30821.1
AF301909.1 14 2006 AAG33495.1
AK000226.1 14 2189 BAA91021.1
AK000384.1 13 1494 BAA91130.1
AK025012.1 7 1159 BAB15052.1
AK300991.1 14 1441
AK308040.1 14 2095
AY358368.1 14 2010 AAQ88734.1
BC038405.1 13 1446 AAH38405.1
DQ491193.1 13 1496

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion SCT RASSF7 IRF7 PHRF1 LRRC56 MIR210HG LOC143666 HRAS CDHR5 MIR210 LMNTD2 LOC101059906
nsv552861 Chr.11:589246 - 662407 on Build GRCh38 Loss SCT IRF7 PHRF1 DRD4 DEAF1 CDHR5
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss CEND1 RNH1 LOC101927503 MUC5AC TOLLIP MUC2 MUC6 TALDO1 HRAS LMNTD2 SCT SIGIRR MIR6744 DRD4 PTDSS2 CD151 DEAF1 POLR2L CDHR5 MIR210 PIDD1 TMEM80 PDDC1 IRF7 LRRC56 CRACR2B CHID1 MIR210HG ANO9 TOLLIP-AS1 MUC5B SLC25A22 LOC101059906 PNPLA2 RASSF7 TSPAN4 PHRF1 EPS8L2 LOC143666 SNORA52 RPLP2 LOC171391 PANO1 AP2A2
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain IRF7 LRRC56 MIR210HG HRAS LMNTD2 SCT RASSF7 PHRF1 DRD4 DEAF1 LOC143666 CDHR5 MIR210
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion CEND1 RNH1 TALDO1 HRAS LMNTD2 SCT SIGIRR PKP3 DRD4 PTDSS2 CD151 DEAF1 POLR2L CDHR5 MIR210 PIDD1 TMEM80 PDDC1 IRF7 LRRC56 CRACR2B CHID1 MIR210HG ANO9 B4GALNT4 SLC25A22 LOC101059906 PNPLA2 RASSF7 TSPAN4 PHRF1 EPS8L2 LOC143666 SNORA52 RPLP2 LOC171391 PANO1 AP2A2
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain RNH1 IRF7 LRRC56 MIR210HG HRAS LMNTD2 LOC101059906 SCT RASSF7 PHRF1 DRD4 PTDSS2 DEAF1 LOC143666 CDHR5 MIR210
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion CEND1 RNH1 TALDO1 HRAS LMNTD2 SCT DRD4 PTDSS2 CD151 DEAF1 POLR2L CDHR5 MIR210 PIDD1 TMEM80 PDDC1 IRF7 LRRC56 CRACR2B CHID1 MIR210HG SLC25A22 LOC101059906 PNPLA2 RASSF7 TSPAN4 PHRF1 EPS8L2 LOC143666 SNORA52 RPLP2 LOC171391 PANO1
dgv1524n54 Chr.11:610277 - 619789 on Build GRCh38 Loss IRF7 PHRF1 CDHR5
nsv552856 Chr.11:549119 - 619789 on Build GRCh38 Gain RASSF7 IRF7 PHRF1 LRRC56 MIR210HG LOC143666 CDHR5 MIR210 LMNTD2
nsv552854 Chr.11:511805 - 619789 on Build GRCh38 Loss RASSF7 IRF7 PHRF1 LRRC56 MIR210HG LOC143666 HRAS CDHR5 MIR210 LMNTD2 LOC101059906
dgv1523n54 Chr.11:557342 - 656940 on Build GRCh38 Gain SCT RASSF7 IRF7 PHRF1 DRD4 MIR210HG DEAF1 LOC143666 CDHR5 MIR210 LMNTD2
nsv552865 Chr.11:612843 - 626730 on Build GRCh38 Loss SCT IRF7 CDHR5
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss RNH1 IRF7 LRRC56 MIR210HG ANO9 HRAS B4GALNT4 LMNTD2 LOC101059906 IFITM5 RASSF7 SIGIRR PHRF1 PKP3 IFITM2 PTDSS2 PGGHG IFITM1 LOC143666 CDHR5 MIR210 IFITM3
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss CEND1 RNH1 LOC101927503 MUC5AC TOLLIP MUC2 MUC6 TALDO1 HRAS LMNTD2 SCT SIGIRR PKP3 MIR6744 DRD4 PTDSS2 CD151 DEAF1 POLR2L CDHR5 MIR210 PIDD1 TMEM80 PDDC1 IRF7 LRRC56 CRACR2B CHID1 MIR210HG ANO9 B4GALNT4 MUC5B SLC25A22 LOC101059906 PNPLA2 RASSF7 TSPAN4 PHRF1 EPS8L2 LOC143666 SNORA52 RPLP2 LOC171391 PANO1 AP2A2
nsv552862 Chr.11:605856 - 619789 on Build GRCh38 Loss IRF7 PHRF1 CDHR5
esv2762889 Chr.11:606294 - 653614 on Build GRCh38 Loss SCT IRF7 PHRF1 DRD4 DEAF1 CDHR5
nsv528415 Chr.11:558884 - 620599 on Build GRCh38 Loss RASSF7 IRF7 PHRF1 MIR210HG LOC143666 CDHR5 MIR210 LMNTD2

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