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See other CDHR5 CNV Assays ›
Gene Symbol
CDHR5
Assay Reference Genome
Location

Chr.11:618066 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01610749_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 53841

Gene Name:

 cadherin related family member 5

Gene Aliases:

 MLPCDH, MU-PCDH, MUCDHL, MUPCDH

Location:

 Chr.11:616565-625067 on Build GRCh38

Assay Gene Location:

 Within Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDHR5 NM_001171968.1 14 2153 NP_001165439.1
NM_021924.4 14 2171 NP_068743.2
NM_031264.3 13 1589 NP_112554.2
XM_006718253.3 14 1831 XP_006718316.1
XM_011520188.2 14 1738 XP_011518490.1
XM_011520189.2 14 1645 XP_011518491.1
XM_011520190.2 12 1404 XP_011518492.1
XM_011520191.2 XP_011518493.1
AF258675.1 AAG16732.1
AF258676.1 15 2327 AAG16733.1
AF276242.1 13 1424 AAG30821.1
AF301909.1 14 2006 AAG33495.1
AK000226.1 14 2189 BAA91021.1
AK000384.1 13 1494 BAA91130.1
AK025012.1 7 1159 BAB15052.1
AK300991.1 14 1441
AK308040.1 14 2095
AY358368.1 14 2010 AAQ88734.1
BC038405.1 13 1446 AAH38405.1
DQ491193.1 13 1496

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion HRAS CDHR5 LOC101059906 MIR210HG SCT MIR210 IRF7 LRRC56 PHRF1 LMNTD2 RASSF7 LOC143666
nsv552861 Chr.11:589246 - 662407 on Build GRCh38 Loss CDHR5 DRD4 SCT IRF7 PHRF1 DEAF1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss TMEM80 PIDD1 LOC101059906 PANO1 PDDC1 CRACR2B MIR210 TOLLIP-AS1 TOLLIP LOC143666 CEND1 AP2A2 CHID1 LOC171391 CDHR5 MUC2 SIGIRR RNH1 LMNTD2 ANO9 RPLP2 MUC5AC PTDSS2 MUC6 HRAS TALDO1 IRF7 MUC5B PHRF1 SLC25A22 DEAF1 SNORA52 DRD4 LOC101927503 MIR210HG CD151 SCT POLR2L LRRC56 EPS8L2 PNPLA2 MIR6744 TSPAN4 RASSF7
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain HRAS MIR210 IRF7 PHRF1 DEAF1 LOC143666 CDHR5 DRD4 MIR210HG SCT LRRC56 LMNTD2 RASSF7
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain PTDSS2 HRAS LOC101059906 MIR210 IRF7 PHRF1 DEAF1 LOC143666 CDHR5 DRD4 MIR210HG SCT LRRC56 RNH1 LMNTD2 RASSF7
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion TMEM80 PIDD1 LOC101059906 PANO1 PDDC1 CRACR2B MIR210 LOC143666 CEND1 AP2A2 CHID1 LOC171391 CDHR5 SIGIRR RNH1 LMNTD2 ANO9 RPLP2 PTDSS2 B4GALNT4 HRAS TALDO1 IRF7 PHRF1 SLC25A22 DEAF1 SNORA52 DRD4 MIR210HG CD151 SCT PKP3 POLR2L LRRC56 EPS8L2 PNPLA2 TSPAN4 RASSF7
dgv1524n54 Chr.11:610277 - 619789 on Build GRCh38 Loss CDHR5 IRF7 PHRF1
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion TMEM80 PIDD1 LOC101059906 PANO1 PDDC1 CRACR2B MIR210 LOC143666 CEND1 CHID1 LOC171391 CDHR5 RNH1 LMNTD2 RPLP2 PTDSS2 HRAS TALDO1 IRF7 PHRF1 SLC25A22 DEAF1 SNORA52 DRD4 MIR210HG CD151 SCT POLR2L LRRC56 EPS8L2 PNPLA2 TSPAN4 RASSF7
nsv552856 Chr.11:549119 - 619789 on Build GRCh38 Gain CDHR5 MIR210HG MIR210 IRF7 LRRC56 PHRF1 LMNTD2 RASSF7 LOC143666
nsv552865 Chr.11:612843 - 626730 on Build GRCh38 Loss CDHR5 SCT IRF7
dgv1522n54 Chr.11:557342 - 656845 on Build GRCh38 Loss CDHR5 DRD4 MIR210HG SCT MIR210 IRF7 PHRF1 DEAF1 LMNTD2 RASSF7 LOC143666
nsv467634 Chr.11:511805 - 619789 on Build GRCh38 Loss HRAS CDHR5 LOC101059906 MIR210HG MIR210 IRF7 LRRC56 PHRF1 LMNTD2 RASSF7 LOC143666
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss PTDSS2 B4GALNT4 IFITM3 IFITM1 HRAS LOC101059906 MIR210 IRF7 PHRF1 LOC143666 IFITM5 CDHR5 PGGHG MIR210HG PKP3 SIGIRR LRRC56 IFITM2 RNH1 LMNTD2 RASSF7 ANO9
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss TMEM80 PIDD1 LOC101059906 PANO1 PDDC1 CRACR2B MIR210 TOLLIP LOC143666 CEND1 AP2A2 CHID1 LOC171391 CDHR5 MUC2 SIGIRR RNH1 LMNTD2 ANO9 RPLP2 MUC5AC PTDSS2 B4GALNT4 MUC6 HRAS TALDO1 IRF7 MUC5B PHRF1 SLC25A22 DEAF1 SNORA52 DRD4 LOC101927503 MIR210HG CD151 SCT PKP3 POLR2L LRRC56 EPS8L2 PNPLA2 MIR6744 TSPAN4 RASSF7
nsv552862 Chr.11:605856 - 619789 on Build GRCh38 Loss CDHR5 IRF7 PHRF1
esv2762889 Chr.11:606294 - 653614 on Build GRCh38 Loss CDHR5 DRD4 SCT IRF7 PHRF1 DEAF1
nsv528415 Chr.11:558884 - 620599 on Build GRCh38 Loss CDHR5 MIR210HG MIR210 IRF7 PHRF1 LMNTD2 RASSF7 LOC143666

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