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See other ACAP3 CNV Assays ›
Gene Symbol
ACAP3
Assay Reference Genome
Location

Chr.1:1295531 on build GRCh38
Cytoband
1p36.33
Assay ID Hs01622728_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 116983

Gene Name:

 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3

Gene Aliases:

 CENTB5

Location:

 Chr.1:1292384-1307925 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 19 - Exon 20
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ACAP3 NM_030649.2 NP_085152.2
XM_005244715.2 XP_005244772.1
XM_005244717.3 XP_005244774.1
XM_011540606.2 XP_011538908.1
XM_011540607.1 XP_011538909.1
XM_011540608.2 XP_011538910.1
XM_011540609.2 XP_011538911.1
XM_017000233.1 XP_016855722.1
AB051503.1 BAB21807.1
AF411981.1 AAL04165.1
AK093954.1 BAC04257.1
BC004874.2 AAH04874.2
BC021851.1 AAH21851.1
BC051194.1 AAH51194.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv817616 Chr.1:1257135 - 1306704 on Build GRCh38 Loss SCNN1D ACAP3 MIR6726 UBE2J2
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss OR4F16 LOC100132287 FAM138A LOC100130417 SDF4 B3GALT6 ANKRD65 MORN1 TNFRSF4 LOC100287934 FAM87B SLC35E2 SSU72 LOC105378947 ATAD3C LOC100288175 MIR6859-2 LOC105378948 TMEM88B WASH7P GABRD PLEKHN1 AGRN LOC105378592 LOC148413 MMP23B MIR6859-1 GNB1 CFAP74 MIR429 DDX11L1 LINC01128 UBE2J2 SKI ATAD3B MIR6723 MIR1302-2 OR4F29 CDK11A SLC35E2B MTND1P23 OR4F5 TMEM240 AURKAIP1 LOC107984841 SAMD11 CCNL2 FAM41C MRPL20 NOC2L LOC100133331 TTLL10 LOC100288069 CPTP ACAP3 MIR200A FAAP20 CALML6 MIB2 LOC105378589 TAS1R3 LOC100506504 HES4 MMP23A TMEM52 NADK PERM1 MIR200B LOC729737 LOC101928626 CDK11B FNDC10 C1orf159 MTND2P28 PRKCZ ATAD3A ISG15 LINC00115 DVL1 FAM132A LOC105378591 TTLL10-AS1 TNFRSF18 MXRA8 SCNN1D MIR6726 PUSL1 CPSF3L LOC100134822 RNF223 KLHL17 LOC102725121 LOC100129534 LOC105378949 LOC102724312 LOC284600 MIR6808 MIR6727 LOC107985729 LOC107985728 VWA1 LINC01342
nsv544965 Chr.1:1217251 - 1306704 on Build GRCh38 Loss SCNN1D FAM132A ACAP3 MIR6726 SDF4 B3GALT6 UBE2J2
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss CPTP DVL1 MIR6808 ACAP3 MIR6727 TAS1R3 MIR6726 PUSL1 CPSF3L
dgv25n54 Chr.1:1290683 - 1306366 on Build GRCh38 Loss SCNN1D ACAP3 MIR6726
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss FAM132A ACAP3 MIR429 SDF4 MIR200A MIR200B B3GALT6 UBE2J2 TTLL10-AS1 TNFRSF18 C1orf159 SCNN1D MIR6726 TNFRSF4 LINC01342 RNF223 TTLL10
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication CPTP FAM132A ACAP3 MIR429 SDF4 MIR200A B3GALT6 UBE2J2 TTLL10-AS1 TNFRSF18 SCNN1D TAS1R3 MIR6726 PUSL1 TNFRSF4 CPSF3L RNF223 LOC100288175 LOC105378948 MIR6727 MIR200B C1orf159 AGRN LINC01342 TTLL10
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion MXRA8 CPTP DVL1 MIR6808 SCNN1D ACAP3 MIR6727 TAS1R3 MIR6726 PUSL1 CPSF3L AURKAIP1
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss CPTP ACAP3 LOC100130417 SDF4 MIR200A B3GALT6 MIB2 ANKRD65 TAS1R3 HES4 TNFRSF4 MMP23A LOC100287934 FAM87B SLC35E2 SSU72 NADK ATAD3C LOC100288175 PERM1 LOC105378948 TMEM88B MIR200B CDK11B FNDC10 C1orf159 PLEKHN1 AGRN LOC148413 MMP23B ATAD3A ISG15 LINC00115 DVL1 FAM132A MIR429 LINC01128 UBE2J2 TTLL10-AS1 TNFRSF18 ATAD3B MXRA8 SCNN1D MIR6726 PUSL1 CDK11A SLC35E2B CPSF3L RNF223 KLHL17 TMEM240 AURKAIP1 LOC102724312 LOC284600 MIR6808 MIR6727 SAMD11 CCNL2 LOC107985729 FAM41C MRPL20 LOC107985728 NOC2L VWA1 LINC01342 TTLL10 LOC100288069
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion CPTP DVL1 FAM132A ACAP3 MIR429 SDF4 MIR200A B3GALT6 UBE2J2 TTLL10-AS1 TNFRSF18 ATAD3B MXRA8 MIB2 ANKRD65 SCNN1D TAS1R3 MIR6726 PUSL1 TNFRSF4 CPSF3L TMEM240 AURKAIP1 SSU72 ATAD3C LOC102724312 MIR6808 TMEM88B MIR6727 MIR200B CCNL2 CDK11B FNDC10 C1orf159 LOC107985729 MRPL20 LOC148413 VWA1 MMP23B LINC01342 ATAD3A TTLL10
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain MXRA8 CPTP DVL1 MIR6808 SCNN1D ACAP3 MIR6727 TAS1R3 MIR6726 PUSL1 CPSF3L
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss CPTP DVL1 MIR6808 ACAP3 MIR6727 UBE2J2 MXRA8 SCNN1D TAS1R3 MIR6726 PUSL1 CPSF3L AURKAIP1
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain CPTP DVL1 FAM132A ACAP3 MIR429 LOC100130417 SDF4 MIR200A B3GALT6 UBE2J2 TTLL10-AS1 TNFRSF18 MXRA8 ANKRD65 SCNN1D TAS1R3 MIR6726 HES4 PUSL1 TNFRSF4 CPSF3L RNF223 KLHL17 AURKAIP1 LOC100288175 LOC284600 MIR6808 PERM1 LOC105378948 TMEM88B MIR6727 SAMD11 MIR200B CCNL2 C1orf159 PLEKHN1 AGRN MRPL20 LOC148413 LOC107985728 NOC2L LINC01342 TTLL10 ISG15
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain FAM132A ACAP3 MIR429 MIR6727 SDF4 MIR200A MIR200B B3GALT6 UBE2J2 TTLL10-AS1 TNFRSF18 SCNN1D MIR6726 PUSL1 TNFRSF4 CPSF3L TTLL10

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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