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See other NAGPA CNV Assays ›
Gene Symbol
NAGPA
Assay Reference Genome
Location

Chr.16:5033400 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01643476_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 51172

Gene Name:

 N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase

Gene Aliases:

 APAA, UCE

Location:

 Chr.16:5024844-5033941 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NAGPA NM_016256.3 2 442 NP_057340.2
XM_011522517.2 2 442 XP_011520819.1
AF187072.1 2 415 AAF08273.1
AK025570.1 2 441
AK026122.1 2 418
AK127952.1 2 436
AK302916.1 2 442
AK314320.1 2 436
BC012194.1 2 432 AAH12194.1
DA879815.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1722 Chr.16:5031097 - 5075947 on Build GRCh38 Deletion NAGPA-AS1 NAGPA ALG1 C16orf89
nsv1042612 Chr.16:4965694 - 5150514 on Build GRCh38 Loss NAGPA-AS1 NAGPA ALG1 C16orf89 EEF2KMT SEC14L5
esv3892762 Chr.16:4967386 - 5060625 on Build GRCh38 Gain NAGPA-AS1 NAGPA C16orf89 SEC14L5
nsv428318 Chr.16:5011594 - 5374828 on Build GRCh38 Gain NAGPA-AS1 RBFOX1 NAGPA ALG1 C16orf89 EEF2KMT SEC14L5
esv25186 Chr.16:4858500 - 5142800 on Build GRCh38 Gain NAGPA-AS1 UBN1 NAGPA ALG1 C16orf89 PPL EEF2KMT SEC14L5
esv3637713 Chr.16:4957958 - 5307305 on Build GRCh38 Gain NAGPA-AS1 RBFOX1 NAGPA ALG1 C16orf89 EEF2KMT SEC14L5
esv3637714 Chr.16:4958035 - 5079276 on Build GRCh38 Gain NAGPA-AS1 NAGPA ALG1 C16orf89 SEC14L5
esv2422516 Chr.16:4775920 - 5160979 on Build GRCh38 Deletion NAGPA-AS1 UBN1 GLYR1 NAGPA ALG1 SMIM22 SEPT12 C16orf89 PPL EEF2KMT SEC14L5 ROGDI
nsv1046986 Chr.16:4049000 - 5555721 on Build GRCh38 Gain NAGPA-AS1 RBFOX1 UBN1 NUDT16L1 C16orf96 SMIM22 SEPT12 GLIS2-AS1 DNAJA3 ANKS3 LOC105371063 MIR6769A HMOX2 SRL GLIS2 EEF2KMT UBALD1 CORO7 ZNF500 LINC01569 VASN C16orf89 PPL NMRAL1 CORO7-PAM16 SEC14L5 PAM16 CDIP1 GLYR1 TFAP4 C16orf71 ADCY9 MGRN1 NAGPA ALG1 ROGDI
esv34300 Chr.16:5005938 - 5322534 on Build GRCh38 Gain NAGPA-AS1 RBFOX1 NAGPA ALG1 C16orf89 EEF2KMT SEC14L5
nsv1038475 Chr.16:5004985 - 5310633 on Build GRCh38 Gain NAGPA-AS1 RBFOX1 NAGPA ALG1 C16orf89 EEF2KMT SEC14L5
esv2760069 Chr.16:4922849 - 5374828 on Build GRCh38 Gain+Loss NAGPA-AS1 RBFOX1 NAGPA ALG1 C16orf89 PPL EEF2KMT SEC14L5
nsv571303 Chr.16:4960912 - 5284683 on Build GRCh38 Loss NAGPA-AS1 RBFOX1 NAGPA ALG1 C16orf89 EEF2KMT SEC14L5
nsv817715 Chr.16:5006294 - 5309352 on Build GRCh38 Gain NAGPA-AS1 RBFOX1 NAGPA ALG1 C16orf89 EEF2KMT SEC14L5
nsv1039432 Chr.16:5013335 - 5074451 on Build GRCh38 Loss NAGPA-AS1 NAGPA ALG1 C16orf89 SEC14L5

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