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See other CASKIN1 CNV Assays ›
Gene Symbol
CASKIN1
Assay Reference Genome
Location

Chr.16:2187237 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01648710_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 57524

Gene Name:

 CASK interacting protein 1

Gene Aliases:

 ANKS5A

Location:

 Chr.16:2177183-2196464 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 7 - Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CASKIN1 NM_020764.3 NP_065815.1
AF451977.1 AAL49758.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication TRAF7 MIR4717 TPSAB1 FBXL16 LOC105371046 PKD1 ABCA3 STUB1 CCDC78 LOC105371038 LOC105371045 MIR5587 SNHG9 LOC652276 RAB26 TMEM8A WASIR2 LMF1 SNHG19 MCRIP2 PTX4 MIR1225 NUBP2 SNORA10 NTN3 HBQ1 PRR25 HBA2 CASKIN1 CRAMP1 HN1L C16orf59 RHOT2 MIR3180-5 HAGH PRSS29P ECI1 MRPL28 PDIA2 EME2 WDR90 NPRL3 PRR35 RNF151 E4F1 SNORA64 RPL23AP5 BRICD5 FAM173A PRSS27 TMEM204 LOC105371049 MAPK8IP3 NOXO1 RPL3L LOC729652 CLCN7 MRPS34 SNORA78 CACNA1H MIR6859-4 UNKL LOC100287175 WFIKKN1 TPSD1 SNRNP25 MIR4516 MEIOB MPG ZNF598 PIGQ MIR6767 LOC105371184 ATP6V0C TPSB2 MIR3178 NTHL1 FAM234A RAB40C HS3ST6 MIR3177 SLC9A3R2 PDPK1 NME4 IFT140 IGFALS ARHGDIG DECR2 CCNF POLR3K HBZ UBE2I LMF1-AS1 MSRB1 LOC106660606 LOC100134368 SSTR5 SSTR5-AS1 DNASE1L2 NHLRC4 LOC101929280 TSC2 LUC7L METTL26 MIR940 RPS2 TPSG1 C16orf91 CCDC154 FLJ42627 SNORD60 NPW C1QTNF8 MIR3677 HAGHL LINC00235 GNPTG HBA1 RPUSD1 RNPS1 ERVK13-1 LOC107984876 TBL3 MIR6768 NDUFB10 LINC00254 SOX8 DDX11L10 SPSB3 MIR662 GNG13 MLST8 NME3 SYNGR3 PGP CEMP1 RAB11FIP3 AXIN1 MSLN RGS11 BAIAP3 ABCA17P TBC1D24 LOC107987233 MIR6511B1 LOC105371047 GFER RHBDL1 JMJD8 FAHD1 MIR3176 CHTF18 TELO2 TSR3 METRN RHBDF1 HBM WDR24 KCTD5 CAPN15 AMDHD2 NARFL
dgv4859n54 Chr.16:1971892 - 2264400 on Build GRCh38 Loss TRAF7 E4F1 MLST8 BRICD5 PKD1 SYNGR3 PGP LOC105371049 NOXO1 DNASE1L2 TSC2 RAB26 MIR6511B1 GFER SNHG19 MIR4516 ZNF598 MIR1225 SNORD60 NPW CASKIN1 MIR3180-5 NTHL1 ECI1 RNPS1 SLC9A3R2 TBL3
dgv4861n54 Chr.16:2083900 - 2246850 on Build GRCh38 Loss TRAF7 SNHG19 MIR4516 E4F1 MLST8 MIR1225 BRICD5 PKD1 SNORD60 PGP LOC105371049 CASKIN1 MIR3180-5 ECI1 DNASE1L2 TSC2 RAB26 MIR6511B1
dgv4863n54 Chr.16:2141733 - 2274302 on Build GRCh38 Loss TRAF7 SNHG19 E4F1 MLST8 BRICD5 SNORD60 PGP CASKIN1 MIR3677 LOC106660606 ECI1 RNPS1 DNASE1L2 RAB26 MIR940
nsv571190 Chr.16:2055054 - 2200730 on Build GRCh38 Loss TRAF7 MIR3180-5 SNHG19 MIR4516 MIR1225 PKD1 SNORD60 TSC2 RAB26 LOC105371049 CASKIN1 MIR6511B1
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain TRAF7 MIR4717 E4F1 MLST8 BRICD5 PKD1 ABCA3 PGP CEMP1 LOC105371049 CCNF LOC729652 LOC106660606 ABCA17P DNASE1L2 TBC1D24 LOC652276 TSC2 RAB26 MIR940 MIR6511B1 SNHG19 MIR4516 MIR1225 MIR6767 SNORD60 NTN3 CASKIN1 MIR3677 ATP6V0C C16orf59 MIR3180-5 MIR3178 ECI1 RNPS1 AMDHD2 PDPK1 MIR6768
nsv457351 Chr.16:2156590 - 2274302 on Build GRCh38 Loss TRAF7 LOC106660606 E4F1 ECI1 RNPS1 MLST8 DNASE1L2 BRICD5 PGP CASKIN1 MIR940 MIR3677
nsv952902 Chr.16:2143400 - 2339999 on Build GRCh38 Deletion TRAF7 MIR4717 SNHG19 E4F1 MLST8 BRICD5 SNORD60 ABCA3 PGP CASKIN1 MIR3677 LOC106660606 ECI1 RNPS1 DNASE1L2 RAB26 MIR940

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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