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See other CDHR5 CNV Assays ›
Gene Symbol
CDHR5
Assay Reference Genome
Location

Chr.11:619155 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01652312_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 53841

Gene Name:

 cadherin related family member 5

Gene Aliases:

 MLPCDH, MU-PCDH, MUCDHL, MUPCDH

Location:

 Chr.11:616565-625067 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 12 - Exon 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDHR5 NM_001171968.1 NP_001165439.1
NM_021924.4 NP_068743.2
NM_031264.3 NP_112554.2
XM_006718253.3 XP_006718316.1
XM_011520188.2 XP_011518490.1
XM_011520189.2 XP_011518491.1
XM_011520190.2 XP_011518492.1
XM_011520191.2 XP_011518493.1
AF258675.1 AAG16732.1
AF258676.1 AAG16733.1
AF276242.1 AAG30821.1
AF301909.1 AAG33495.1
AK000226.1 BAA91021.1
AK000384.1 BAA91130.1
AK025012.1 BAB15052.1
AK300991.1
AK308040.1
AY358368.1 AAQ88734.1
BC038405.1 AAH38405.1
DQ491193.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion SCT LOC143666 LRRC56 RASSF7 MIR210HG MIR210 HRAS LOC101059906 IRF7 CDHR5 LMNTD2 PHRF1
nsv552861 Chr.11:589246 - 662407 on Build GRCh38 Loss SCT DRD4 IRF7 CDHR5 DEAF1 PHRF1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss CD151 SLC25A22 LRRC56 TALDO1 LOC101059906 IRF7 LOC101927503 PANO1 POLR2L PHRF1 SNORA52 PTDSS2 MIR210HG TMEM80 HRAS MUC5AC RNH1 SIGIRR CHID1 SCT MIR6744 TOLLIP ANO9 LOC143666 MUC5B RASSF7 PDDC1 MUC2 TOLLIP-AS1 PNPLA2 EPS8L2 AP2A2 CEND1 PIDD1 DRD4 RPLP2 MIR210 TSPAN4 CDHR5 LMNTD2 DEAF1 MUC6 CRACR2B LOC171391
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain SCT LOC143666 LRRC56 RASSF7 IRF7 PHRF1 MIR210HG DRD4 MIR210 HRAS CDHR5 LMNTD2 DEAF1
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion CD151 PKP3 SLC25A22 LRRC56 TALDO1 B4GALNT4 LOC101059906 IRF7 PANO1 POLR2L PHRF1 SNORA52 PTDSS2 MIR210HG TMEM80 HRAS RNH1 SIGIRR CHID1 SCT ANO9 LOC143666 RASSF7 PDDC1 PNPLA2 EPS8L2 AP2A2 CEND1 PIDD1 DRD4 RPLP2 MIR210 TSPAN4 CDHR5 LMNTD2 DEAF1 CRACR2B LOC171391
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain SCT LOC143666 LRRC56 RASSF7 LOC101059906 IRF7 PHRF1 PTDSS2 MIR210HG DRD4 MIR210 HRAS RNH1 CDHR5 LMNTD2 DEAF1
dgv1524n54 Chr.11:610277 - 619789 on Build GRCh38 Loss IRF7 CDHR5 PHRF1
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion CD151 SLC25A22 LRRC56 TALDO1 LOC101059906 IRF7 PANO1 POLR2L PHRF1 SNORA52 PTDSS2 MIR210HG TMEM80 HRAS RNH1 CHID1 SCT LOC143666 RASSF7 PDDC1 PNPLA2 EPS8L2 CEND1 PIDD1 DRD4 RPLP2 MIR210 TSPAN4 CDHR5 LMNTD2 DEAF1 CRACR2B LOC171391
nsv552856 Chr.11:549119 - 619789 on Build GRCh38 Gain LOC143666 LRRC56 RASSF7 MIR210HG MIR210 IRF7 CDHR5 LMNTD2 PHRF1
dgv1523n54 Chr.11:557342 - 656940 on Build GRCh38 Gain SCT LOC143666 RASSF7 MIR210HG DRD4 MIR210 IRF7 CDHR5 LMNTD2 DEAF1 PHRF1
nsv552865 Chr.11:612843 - 626730 on Build GRCh38 Loss SCT IRF7 CDHR5
nsv552854 Chr.11:511805 - 619789 on Build GRCh38 Loss LOC143666 LRRC56 RASSF7 MIR210HG MIR210 HRAS LOC101059906 IRF7 CDHR5 LMNTD2 PHRF1
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss ANO9 LOC143666 PKP3 LRRC56 RASSF7 IFITM2 B4GALNT4 PGGHG LOC101059906 IRF7 PHRF1 PTDSS2 MIR210HG MIR210 HRAS IFITM1 RNH1 CDHR5 LMNTD2 SIGIRR IFITM3 IFITM5
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss CD151 PKP3 SLC25A22 LRRC56 TALDO1 B4GALNT4 LOC101059906 IRF7 LOC101927503 PANO1 POLR2L PHRF1 SNORA52 PTDSS2 MIR210HG TMEM80 HRAS MUC5AC RNH1 SIGIRR CHID1 SCT MIR6744 TOLLIP ANO9 LOC143666 MUC5B RASSF7 PDDC1 MUC2 PNPLA2 EPS8L2 AP2A2 CEND1 PIDD1 DRD4 RPLP2 MIR210 TSPAN4 CDHR5 LMNTD2 DEAF1 MUC6 CRACR2B LOC171391
nsv552862 Chr.11:605856 - 619789 on Build GRCh38 Loss IRF7 CDHR5 PHRF1
esv2762889 Chr.11:606294 - 653614 on Build GRCh38 Loss SCT DRD4 IRF7 CDHR5 DEAF1 PHRF1
nsv528415 Chr.11:558884 - 620599 on Build GRCh38 Loss LOC143666 RASSF7 MIR210HG MIR210 IRF7 CDHR5 LMNTD2 PHRF1

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