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Gene Symbol
SPSB3
Assay Reference Genome
Location

Chr.16:1777355 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01652773_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 90864

Gene Name:

 splA/ryanodine receptor domain and SOCS box containing 3

Gene Aliases:

 C16orf31, SSB3

Location:

 Chr.16:1776712-1782605 on Build GRCh38

Assay Gene Location:

 Within Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPSB3 NM_001324081.1 7 879 NP_001311010.1
NM_080861.3 7 901 NP_543137.2
XM_005255673.4 7 1091 XP_005255730.1
AF403028.1 6 810 AAL57347.1
AK074190.1 7 865
BC007588.1 7 847
BC024244.1 7 865 AAH24244.1
BC041897.1 6 1675 AAH41897.1
BC047441.1 7 843
BI768095.1
BQ930544.1 2 183

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571169 Chr.16:1729694 - 1789022 on Build GRCh38 Loss MRPS34 MAPK8IP3 NME3 MIR3177 SPSB3 NUBP2 EME2
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication BAIAP3 LOC100134368 LOC105371049 PKD1 NPW LINC00254 MSLN METTL26 PGP MIR5587 RHOT2 SYNGR3 NTN3 SNHG19 SSTR5-AS1 MIR3677 TPSB2 ATP6V0C SNORD60 NME4 SPSB3 LOC105371046 NDUFB10 NPRL3 HBM RGS11 RNF151 MEIOB LOC729652 GNG13 TMEM204 AMDHD2 LUC7L RHBDL1 SNHG9 NUBP2 LOC107987233 CCDC78 LOC100287175 RPL3L WDR24 JMJD8 LMF1 MIR4717 ZNF598 TELO2 MIR662 TPSD1 E4F1 CEMP1 CRAMP1 SSTR5 CASKIN1 GFER SOX8 MLST8 FLJ42627 HAGHL MCRIP2 MIR3177 RAB26 MSRB1 GNPTG IGFALS PRR35 MIR1225 WFIKKN1 LOC101929280 LOC105371184 NOXO1 TPSAB1 PRSS29P SLC9A3R2 HN1L DECR2 ARHGDIG NTHL1 HBQ1 MIR3178 CHTF18 ABCA3 POLR3K CCDC154 METRN MPG ECI1 TPSG1 TMEM8A FAM234A BRICD5 HAGH DDX11L10 C1QTNF8 RAB40C RPUSD1 SNORA64 PDIA2 LOC106660606 FAM173A NME3 ABCA17P WDR90 AXIN1 TRAF7 LOC107984876 EME2 MIR3176 TBC1D24 RPL23AP5 LINC00235 MIR3180-5 LOC652276 PTX4 WASIR2 STUB1 LMF1-AS1 PRSS27 CACNA1H LOC105371047 SNORA78 SNRNP25 PRR25 FBXL16 IFT140 PIGQ HBA2 HBA1 RPS2 CCNF HS3ST6 MAPK8IP3 MIR6768 MIR4516 RNPS1 RAB11FIP3 MIR940 C16orf59 MIR6859-4 UNKL KCTD5 CAPN15 HBZ LOC105371038 MRPL28 LOC105371045 MIR6511B1 TBL3 RHBDF1 SNORA10 MRPS34 CLCN7 PDPK1 FAHD1 TSR3 DNASE1L2 UBE2I TSC2 ERVK13-1 C16orf91 MIR6767 NHLRC4 NARFL
nsv571172 Chr.16:1764390 - 1817039 on Build GRCh38 Loss MRPS34 MAPK8IP3 NME3 HAGH SPSB3 NUBP2 IGFALS EME2
nsv1160328 Chr.16:1704619 - 1797867 on Build GRCh38 Deletion MRPS34 MAPK8IP3 NME3 MIR3177 SPSB3 NUBP2 IGFALS EME2
nsv571171 Chr.16:1757779 - 1804539 on Build GRCh38 Gain+Loss MRPS34 MAPK8IP3 NME3 SPSB3 NUBP2 IGFALS EME2
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss MRPS34 MAPK8IP3 HAGH HN1L NUBP2 NME3 MIR3177 SPSB3 IFT140 LOC105371046 CRAMP1 IGFALS EME2
nsv471069 Chr.16:1754356 - 1791032 on Build GRCh38 Loss MRPS34 MAPK8IP3 NME3 SPSB3 NUBP2 IGFALS EME2
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss MRPS34 MEIOB MAPK8IP3 HAGH FAHD1 HN1L TMEM204 NUBP2 LOC105371047 NME3 MIR3177 SPSB3 IFT140 TELO2 LOC105371046 CRAMP1 IGFALS EME2
nsv827500 Chr.16:1761258 - 1795126 on Build GRCh38 Gain MRPS34 MAPK8IP3 NME3 SPSB3 NUBP2 IGFALS EME2
nsv571173 Chr.16:1767596 - 1780436 on Build GRCh38 Loss MRPS34 MAPK8IP3 NME3 SPSB3 EME2
nsv518641 Chr.16:1645775 - 1835631 on Build GRCh38 Loss MRPS34 MEIOB MAPK8IP3 HAGH FAHD1 HN1L NUBP2 NME3 MIR3177 SPSB3 CRAMP1 IGFALS EME2
nsv457336 Chr.16:1752231 - 1791032 on Build GRCh38 Loss MRPS34 MAPK8IP3 NME3 SPSB3 NUBP2 IGFALS EME2
nsv952900 Chr.16:1724500 - 1827999 on Build GRCh38 Deletion MRPS34 MAPK8IP3 NME3 HAGH MIR3177 SPSB3 FAHD1 NUBP2 IGFALS EME2

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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